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Literature DB >> 20592143

High-resolution typing by integration of genome sequencing data in a large tuberculosis cluster.

Anita C Schürch¹, Kristin Kremer, Olaf Daviena, Albert Kiers, Martin J Boeree, Roland J Siezen, Dick van Soolingen.

Abstract

To investigate whether genome sequencing yields more useful markers than those currently used to study the epidemiology of tuberculosis, it was applied to three Mycobacterium tuberculosis isolates of the Harlingen outbreak. Our findings suggest that single nucleotide polymorphisms can be used to identify transmission chains in restriction fragment length polymorphism clusters.

Entities: Disease Species

Mesh：

Substances：
DNA, Bacterial

Year: 2010 PMID： 20592143 PMCID： PMC2937716 DOI： 10.1128/JCM.00370-10

Source DB: PubMed Journal: J Clin Microbiol ISSN： 0095-1137 Impact factor: 5.948

26 in total

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8. The tempo and mode of molecular evolution of Mycobacterium tuberculosis at patient-to-patient scale.

Authors: Anita C Schürch; Kristin Kremer; Albert Kiers; Olaf Daviena; Martin J Boeree; Roland J Siezen; Noel H Smith; Dick van Soolingen
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10. Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints.

Authors: Stefan Niemann; Claudio U Köser; Sebastien Gagneux; Claudia Plinke; Susanne Homolka; Helen Bignell; Richard J Carter; R Keira Cheetham; Anthony Cox; Niall A Gormley; Paula Kokko-Gonzales; Lisa J Murray; Roberto Rigatti; Vincent P Smith; Felix P M Arends; Helen S Cox; Geoff Smith; John A C Archer
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41 in total

1. Whole genome sequence analysis of multidrug-resistant Mycobacterium tuberculosis Beijing isolates from an outbreak in Thailand.

Authors: Sanjib Mani Regmi; Angkana Chaiprasert; Supasak Kulawonganunchai; Sissades Tongsima; Olabisi Oluwabukola Coker; Therdsak Prammananan; Wasna Viratyosin; Iyarit Thaipisuttikul
Journal: Mol Genet Genomics Date: 2015-04-24 Impact factor: 3.291

2. Comparative study of IS6110 restriction fragment length polymorphism and variable-number tandem-repeat typing of Mycobacterium tuberculosis isolates in the Netherlands, based on a 5-year nationwide survey.

Authors: Jessica L de Beer; Jakko van Ingen; Gerard de Vries; Connie Erkens; Maruschka Sebek; Arnout Mulder; Rosa Sloot; Anne-Marie van den Brandt; Mimount Enaimi; Kristin Kremer; Philip Supply; Dick van Soolingen
Journal: J Clin Microbiol Date: 2013-01-30 Impact factor: 5.948

3. Clustering of tuberculosis cases based on variable-number tandem-repeat typing in relation to the population structure of Mycobacterium tuberculosis in the Netherlands.

Authors: Rosa Sloot; Martien W Borgdorff; Jessica L de Beer; Jakko van Ingen; Philip Supply; Dick van Soolingen
Journal: J Clin Microbiol Date: 2013-05-08 Impact factor: 5.948

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Authors: Tao Luo; Chongguang Yang; Sebastien Gagneux; Brigitte Gicquel; Jian Mei; Qian Gao
Journal: J Clin Microbiol Date: 2012-01-11 Impact factor: 5.948