Literature DB >> 21366420

Genotyping of Mycobacterium tuberculosis: application in epidemiologic studies.

Midori Kato-Maeda1, John Z Metcalfe, Laura Flores.   

Abstract

Genotyping is used to track specific isolates of Mycobacterium tuberculosis in a community. It has been successfully used in epidemiologic research (termed 'molecular epidemiology') to study the transmission dynamics of TB. In this article, we review the genetic markers used in molecular epidemiologic studies including the use of whole-genome sequencing technology. We also review the public health application of molecular epidemiologic tools.

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Year:  2011        PMID: 21366420      PMCID: PMC4296029          DOI: 10.2217/fmb.10.165

Source DB:  PubMed          Journal:  Future Microbiol        ISSN: 1746-0913            Impact factor:   3.165


  123 in total

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Review 3.  Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens.

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4.  Longitudinal data analysis for discrete and continuous outcomes.

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5.  Calculation of the stability of the IS6110 banding pattern in patients with persistent Mycobacterium tuberculosis disease.

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Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

6.  High-resolution minisatellite-based typing as a portable approach to global analysis of Mycobacterium tuberculosis molecular epidemiology.

Authors:  E Mazars; S Lesjean; A L Banuls; M Gilbert; V Vincent; B Gicquel; M Tibayrenc; C Locht; P Supply
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8.  Genetic diversity of the Mycobacterium tuberculosis Beijing family in East Asia revealed through refined population structure analysis.

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9.  Stability of Mycobacterium tuberculosis IS6110 restriction fragment length polymorphism patterns and spoligotypes determined by analyzing serial isolates from patients with drug-resistant tuberculosis.

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10.  Outbreak of tuberculosis among homeless persons coinfected with human immunodeficiency virus.

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  53 in total

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4.  Evaluation of 24-locus MIRU-VNTR genotyping in Mycobacterium tuberculosis cluster investigations in four jurisdictions in the United States, 2006-2010.

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5.  Comparison of a semiautomated commercial repetitive-sequence-based PCR method with spoligotyping, 24-locus mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing, and restriction fragment length polymorphism-based analysis of IS6110 for Mycobacterium tuberculosis typing.

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6.  Standard Genotyping Overestimates Transmission of Mycobacterium tuberculosis among Immigrants in a Low-Incidence Country.

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7.  Mycobacterium tuberculosis isolates from single outpatient clinic in Panama City exhibit wide genetic diversity.

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8.  Likelihood-based inference for discretely observed birth-death-shift processes, with applications to evolution of mobile genetic elements.

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Review 9.  Importance of differential identification of Mycobacterium tuberculosis strains for understanding differences in their prevalence, treatment efficacy, and vaccine development.

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Review 10.  Genotyping of Mycobacterium tuberculosis using whole genome sequencing.

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Journal:  Folia Microbiol (Praha)       Date:  2018-03-17       Impact factor: 2.099

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