Literature DB >> 20589441

Accelerating simultaneous algebraic reconstruction technique with motion compensation using CUDA-enabled GPU.

Wai-Man Pang1, Jing Qin, Yuqiang Lu, Yongming Xie, Chee-Kong Chui, Pheng-Ann Heng.   

Abstract

PURPOSE: To accelerate the simultaneous algebraic reconstruction technique (SART) with motion compensation for speedy and quality computed tomography reconstruction by exploiting CUDA-enabled GPU.
METHODS: Two core techniques are proposed to fit SART into the CUDA architecture: (1) a ray-driven projection along with hardware trilinear interpolation, and (2) a voxel-driven back-projection that can avoid redundant computation by combining CUDA shared memory. We utilize the independence of each ray and voxel on both techniques to design CUDA kernel to represent a ray in the projection and a voxel in the back-projection respectively. Thus, significant parallelization and performance boost can be achieved. For motion compensation, we rectify each ray's direction during the projection and back-projection stages based on a known motion vector field.
RESULTS: Extensive experiments demonstrate the proposed techniques can provide faster reconstruction without compromising image quality. The process rate is nearly 100 projections s (-1), and it is about 150 times faster than a CPU-based SART. The reconstructed image is compared against ground truth visually and quantitatively by peak signal-to-noise ratio (PSNR) and line profiles. We further evaluate the reconstruction quality using quantitative metrics such as signal-to-noise ratio (SNR) and mean-square-error (MSE). All these reveal that satisfactory results are achieved. The effects of major parameters such as ray sampling interval and relaxation parameter are also investigated by a series of experiments. A simulated dataset is used for testing the effectiveness of our motion compensation technique. The results demonstrate our reconstructed volume can eliminate undesirable artifacts like blurring.
CONCLUSION: Our proposed method has potential to realize instantaneous presentation of 3D CT volume to physicians once the projection data are acquired.

Mesh:

Year:  2010        PMID: 20589441     DOI: 10.1007/s11548-010-0499-3

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  9 in total

1.  Rapid 3-D cone-beam reconstruction with the simultaneous algebraic reconstruction technique (SART) using 2-D texture mapping hardware.

Authors:  K Mueller; R Yagel
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4.  Algebraic reconstruction techniques (ART) for three-dimensional electron microscopy and x-ray photography.

Authors:  R Gordon; R Bender; G T Herman
Journal:  J Theor Biol       Date:  1970-12       Impact factor: 2.691

5.  Simultaneous algebraic reconstruction technique (SART): a superior implementation of the art algorithm.

Authors:  A H Andersen; A C Kak
Journal:  Ultrason Imaging       Date:  1984-01       Impact factor: 1.578

6.  Fast calculation of the exact radiological path for a three-dimensional CT array.

Authors:  R L Siddon
Journal:  Med Phys       Date:  1985 Mar-Apr       Impact factor: 4.071

7.  Uncertainties in CT-based radiation therapy treatment planning associated with patient breathing.

Authors:  J M Balter; R K Ten Haken; T S Lawrence; K L Lam; J M Robertson
Journal:  Int J Radiat Oncol Biol Phys       Date:  1996-08-01       Impact factor: 7.038

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Authors:  Sadek A Nehmeh; Yusuf E Erdi; Clifton C Ling; Kenneth E Rosenzweig; Heiko Schoder; Steve M Larson; Homer A Macapinlac; Olivia D Squire; John L Humm
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  9 in total
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