Literature DB >> 20589048

Ultra-fast, high-precision image analysis for localization-based super resolution microscopy.

Tingwei Quan1, Pengcheng Li, Fan Long, Shaoqun Zeng, Qingming Luo, Per Niklas Hedde, Gerd Ulrich Nienhaus, Zhen-Li Huang.   

Abstract

Localization-based super resolution microscopy holds superior performances in live cell imaging, but its widespread use is thus far mainly hindered by the slow image analysis speed. Here we show a powerful image analysis method based on the combination of the maximum likelihood algorithm and a Graphics Processing Unit (GPU). Results indicate that our method is fast enough for real-time processing of experimental images even from fast EMCCD cameras working at full frame rate without compromising localization precision or field of view. This newly developed method is also capable of revealing movements from the images immediately after data acquisition, which is of great benefit to live cell imaging.

Mesh:

Year:  2010        PMID: 20589048     DOI: 10.1364/OE.18.011867

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  15 in total

1.  Quantitative evaluation of software packages for single-molecule localization microscopy.

Authors:  Daniel Sage; Hagai Kirshner; Thomas Pengo; Nico Stuurman; Junhong Min; Suliana Manley; Michael Unser
Journal:  Nat Methods       Date:  2015-06-15       Impact factor: 28.547

Review 2.  Optical imaging of nanoscale cellular structures.

Authors:  Per Niklas Hedde; Gerd Ulrich Nienhaus
Journal:  Biophys Rev       Date:  2010-09-08

3.  Optimized sample preparation for single-molecule localization-based superresolution microscopy in yeast.

Authors:  Charlotte Kaplan; Helge Ewers
Journal:  Nat Protoc       Date:  2015-06-11       Impact factor: 13.491

4.  Localization events-based sample drift correction for localization microscopy with redundant cross-correlation algorithm.

Authors:  Yina Wang; Joerg Schnitzbauer; Zhe Hu; Xueming Li; Yifan Cheng; Zhen-Li Huang; Bo Huang
Journal:  Opt Express       Date:  2014-06-30       Impact factor: 3.894

Review 5.  Fluorophore localization algorithms for super-resolution microscopy.

Authors:  Alex Small; Shane Stahlheber
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

Review 6.  Fluorescence nanoscopy. Methods and applications.

Authors:  Jose Requejo-Isidro
Journal:  J Chem Biol       Date:  2013-06-04

7.  Super-resolution localization microscopy: Toward high throughput, high quality, and low cost.

Authors:  Hongqiang Ma; Yang Liu
Journal:  APL Photonics       Date:  2020-06-24

8.  Stochastic Optical Reconstruction Microscopy (STORM).

Authors:  Jianquan Xu; Hongqiang Ma; Yang Liu
Journal:  Curr Protoc Cytom       Date:  2017-07-05

Review 9.  Optical nanoscopy: from acquisition to analysis.

Authors:  Travis J Gould; Samuel T Hess; Joerg Bewersdorf
Journal:  Annu Rev Biomed Eng       Date:  2012-05-03       Impact factor: 9.590

Review 10.  Gold nanoclusters as novel optical probes for in vitro and in vivo fluorescence imaging.

Authors:  Li Shang; G Ulrich Nienhaus
Journal:  Biophys Rev       Date:  2012-04-12
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