Literature DB >> 20583019

The AlkB domain of mammalian ABH8 catalyzes hydroxylation of 5-methoxycarbonylmethyluridine at the wobble position of tRNA.

Ye Fu1, Qing Dai, Wen Zhang, Jin Ren, Tao Pan, Chuan He.   

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Year:  2010        PMID： 20583019      PMCID： PMC3134247          DOI： 10.1002/anie.201001242

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  26 in total

Review 1.  Direct reversal of DNA alkylation damage.

Authors:  Yukiko Mishina; Erica M Duguid; Chuan He
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

2.  Reversal of DNA alkylation damage by two human dioxygenases.

Authors:  Tod Duncan; Sarah C Trewick; Pertti Koivisto; Paul A Bates; Tomas Lindahl; Barbara Sedgwick
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

3.  Cloning of Fatso (Fto), a novel gene deleted by the Fused toes (Ft) mouse mutation.

Authors:  T Peters; K Ausmeier; U Rüther
Journal:  Mamm Genome       Date:  1999-10       Impact factor: 2.957

4.  Abnormal codon recognition of glycyl-tRNA from the posterior silk glands of Bombyx mori.

Authors:  M Kawakami; P A Tsonis; K Nishio; S Takemura
Journal:  J Biochem       Date:  1980-10       Impact factor: 3.387

5.  Human AlkB homolog ABH8 Is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival.

Authors:  Dragony Fu; Jennifer A N Brophy; Clement T Y Chan; Kyle A Atmore; Ulrike Begley; Richard S Paules; Peter C Dedon; Thomas J Begley; Leona D Samson
Journal:  Mol Cell Biol       Date:  2010-03-22       Impact factor: 4.272

6.  Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage.

Authors:  Sarah C Trewick; Timothy F Henshaw; Robert P Hausinger; Tomas Lindahl; Barbara Sedgwick
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

7.  AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation.

Authors:  Rune Ougland; Chun-Mei Zhang; Aivar Liiv; Rune F Johansen; Erling Seeberg; Ya-Ming Hou; Jaanus Remme; Pål Ø Falnes
Journal:  Mol Cell       Date:  2004-10-08       Impact factor: 17.970

8.  A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity.

Authors:  Timothy M Frayling; Nicholas J Timpson; Michael N Weedon; Eleftheria Zeggini; Rachel M Freathy; Cecilia M Lindgren; John R B Perry; Katherine S Elliott; Hana Lango; Nigel W Rayner; Beverley Shields; Lorna W Harries; Jeffrey C Barrett; Sian Ellard; Christopher J Groves; Bridget Knight; Ann-Marie Patch; Andrew R Ness; Shah Ebrahim; Debbie A Lawlor; Susan M Ring; Yoav Ben-Shlomo; Marjo-Riitta Jarvelin; Ulla Sovio; Amanda J Bennett; David Melzer; Luigi Ferrucci; Ruth J F Loos; Inês Barroso; Nicholas J Wareham; Fredrik Karpe; Katharine R Owen; Lon R Cardon; Mark Walker; Graham A Hitman; Colin N A Palmer; Alex S F Doney; Andrew D Morris; George Davey Smith; Andrew T Hattersley; Mark I McCarthy
Journal:  Science       Date:  2007-04-12       Impact factor: 47.728

9.  Variation in FTO contributes to childhood obesity and severe adult obesity.

Authors:  Christian Dina; David Meyre; Sophie Gallina; Emmanuelle Durand; Antje Körner; Peter Jacobson; Lena M S Carlsson; Wieland Kiess; Vincent Vatin; Cecile Lecoeur; Jérome Delplanque; Emmanuel Vaillant; François Pattou; Juan Ruiz; Jacques Weill; Claire Levy-Marchal; Fritz Horber; Natascha Potoczna; Serge Hercberg; Catherine Le Stunff; Pierre Bougnères; Peter Kovacs; Michel Marre; Beverley Balkau; Stéphane Cauchi; Jean-Claude Chèvre; Philippe Froguel
Journal:  Nat Genet       Date:  2007-05-13       Impact factor: 38.330

10.  Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB.

Authors:  Michal A Kurowski; Ashok S Bhagwat; Grzegorz Papaj; Janusz M Bujnicki
Journal:  BMC Genomics       Date:  2003-12-10       Impact factor: 3.969
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  70 in total

1.  Grand challenge commentary: RNA epigenetics?

Authors:  Chuan He
Journal:  Nat Chem Biol       Date:  2010-12       Impact factor: 15.040

Review 2.  Hydroxylation and translational adaptation to stress: some answers lie beyond the STOP codon.

Authors:  M J Katz; L Gándara; A L De Lella Ezcurra; P Wappner
Journal:  Cell Mol Life Sci       Date:  2016-02-13       Impact factor: 9.261

3.  Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification.

Authors:  Chiara Pastore; Irini Topalidou; Farhad Forouhar; Amy C Yan; Matthew Levy; John F Hunt
Journal:  J Biol Chem       Date:  2011-11-07       Impact factor: 5.157

4.  Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism.

Authors:  Kiruthika Selvadurai; Pei Wang; Joseph Seimetz; Raven H Huang
Journal:  Nat Chem Biol       Date:  2014-08-24       Impact factor: 15.040

5.  ALKBH8-mediated formation of a novel diastereomeric pair of wobble nucleosides in mammalian tRNA.

Authors:  Erwin van den Born; Cathrine B Vågbø; Lene Songe-Møller; Vibeke Leihne; Guro F Lien; Grazyna Leszczynska; Andrzej Malkiewicz; Hans E Krokan; Finn Kirpekar; Arne Klungland; Pål Ø Falnes
Journal:  Nat Commun       Date:  2011-02-01       Impact factor: 14.919

6.  Adaptive Response Enzyme AlkB Preferentially Repairs 1-Methylguanine and 3-Methylthymine Adducts in Double-Stranded DNA.

Authors:  Fangyi Chen; Qi Tang; Ke Bian; Zachary T Humulock; Xuedong Yang; Marco Jost; Catherine L Drennan; John M Essigmann; Deyu Li
Journal:  Chem Res Toxicol       Date:  2016-03-15       Impact factor: 3.739

7.  Cellular dynamics of RNA modification.

Authors:  Chengqi Yi; Tao Pan
Journal:  Acc Chem Res       Date:  2011-05-26       Impact factor: 22.384

8.  Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy.

Authors:  Christoph Loenarz; Rok Sekirnik; Armin Thalhammer; Wei Ge; Ekaterina Spivakovsky; Mukram M Mackeen; Michael A McDonough; Matthew E Cockman; Benedikt M Kessler; Peter J Ratcliffe; Alexander Wolf; Christopher J Schofield
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

9.  Sprouts of RNA epigenetics: the discovery of mammalian RNA demethylases.

Authors:  Guanqun Zheng; John Arne Dahl; Yamei Niu; Ye Fu; Arne Klungland; Yun-Gui Yang; Chuan He
Journal:  RNA Biol       Date:  2013-04-17       Impact factor: 4.652

Review 10.  The AlkB Family of Fe(II)/α-Ketoglutarate-dependent Dioxygenases: Repairing Nucleic Acid Alkylation Damage and Beyond.

Authors:  Bogdan I Fedeles; Vipender Singh; James C Delaney; Deyu Li; John M Essigmann
Journal:  J Biol Chem       Date:  2015-07-07       Impact factor: 5.157
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