Literature DB >> 16464003

Direct reversal of DNA alkylation damage.

Yukiko Mishina1, Erica M Duguid, Chuan He.   

Abstract

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Year:  2006        PMID： 16464003      PMCID： PMC2432087          DOI： 10.1021/cr0404702

Source DB:  PubMed          Journal:  Chem Rev        ISSN： 0009-2665            Impact factor:   60.622


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  162 in total

1.  Covalent and selective immobilization of fusion proteins.

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Journal:  J Am Chem Soc       Date:  2003-07-02       Impact factor: 15.419

2.  Labeling of fusion proteins with synthetic fluorophores in live cells.

Authors:  Antje Keppler; Horst Pick; Claudio Arrivoli; Horst Vogel; Kai Johnsson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

3.  Zinc binding by the methylation signaling domain of the Escherichia coli Ada protein.

Authors:  L C Myers; M P Terranova; H M Nash; M A Markus; G L Verdine
Journal:  Biochemistry       Date:  1992-05-19       Impact factor: 3.162

Review 4.  Regulation of repair of alkylation damage in mammalian genomes.

Authors:  S Mitra; B Kaina
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1993

5.  Phase I trial of carmustine plus O6-benzylguanine for patients with recurrent or progressive malignant glioma.

Authors:  H S Friedman; J Pluda; J A Quinn; R B Ewesuedo; L Long; A H Friedman; I Cokgor; O M Colvin; M M Haglund; D M Ashley; J N Rich; J Sampson; A E Pegg; R C Moschel; R E McLendon; J M Provenzale; E S Stewart; S Tourt-Uhlig; A M Garcia-Turner; J E Herndon; D D Bigner; M E Dolan
Journal:  J Clin Oncol       Date:  2000-10-15       Impact factor: 44.544

6.  Repair of O6-benzylguanine by the Escherichia coli Ada and Ogt and the human O6-alkylguanine-DNA alkyltransferases.

Authors:  K Goodtzova; S Kanugula; S Edara; G T Pauly; R C Moschel; A E Pegg
Journal:  J Biol Chem       Date:  1997-03-28       Impact factor: 5.157

7.  DNA binding and nucleotide flipping by the human DNA repair protein AGT.

Authors:  Douglas S Daniels; Tammy T Woo; Kieu X Luu; David M Noll; Neil D Clarke; Anthony E Pegg; John A Tainer
Journal:  Nat Struct Mol Biol       Date:  2004-06-27       Impact factor: 15.369

8.  First principles calculations of the tautomers and pK(a) values of 8-oxoguanine: implications for mutagenicity and repair.

Authors:  Yun Hee Jang; William A Goddard; Katherine T Noyes; Lawrence C Sowers; Sungu Hwang; Doo Soo Chung
Journal:  Chem Res Toxicol       Date:  2002-08       Impact factor: 3.739

9.  Crystal structure of a suicidal DNA repair protein: the Ada O6-methylguanine-DNA methyltransferase from E. coli.

Authors:  M H Moore; J M Gulbis; E J Dodson; B Demple; P C Moody
Journal:  EMBO J       Date:  1994-04-01       Impact factor: 11.598

10.  Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB.

Authors:  Michal A Kurowski; Ashok S Bhagwat; Grzegorz Papaj; Janusz M Bujnicki
Journal:  BMC Genomics       Date:  2003-12-10       Impact factor: 3.969
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  44 in total

1.  A quantum chemical study of repair of O6-methylguanine to guanine by tyrosine: evaluation of the winged helix-turn-helix model.

Authors:  Saumya Tiwari; Phool Chand Mishra
Journal:  J Mol Model       Date:  2009-05-07       Impact factor: 1.810

2.  Using the bias from flow to elucidate single DNA repair protein sliding and interactions with DNA.

Authors:  Yihan Lin; Tong Zhao; Xing Jian; Zishaan Farooqui; Xiaohui Qu; Chuan He; Aaron R Dinner; Norbert F Scherer
Journal:  Biophys J       Date:  2009-03-04       Impact factor: 4.033

3.  Exploring the roles of nucleobase desolvation and shape complementarity during the misreplication of O(6)-methylguanine.

Authors:  Delia Chavarria; Andrea Ramos-Serrano; Ichiro Hirao; Anthony J Berdis
Journal:  J Mol Biol       Date:  2011-07-23       Impact factor: 5.469

Review 4.  Investigating the biochemical impact of DNA damage with structure-based probes: abasic sites, photodimers, alkylation adducts, and oxidative lesions.

Authors:  Heidi A Dahlmann; V G Vaidyanathan; Shana J Sturla
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

5.  Crystal structure of the RNA demethylase ALKBH5 from zebrafish.

Authors:  Weizhong Chen; Liang Zhang; Guanqun Zheng; Ye Fu; Quanjiang Ji; Fange Liu; Hao Chen; Chuan He
Journal:  FEBS Lett       Date:  2014-02-20       Impact factor: 4.124

Review 6.  Chlamydomonas reinhardtii: a convenient model system for the study of DNA repair in photoautotrophic eukaryotes.

Authors:  Daniel Vlcek; Andrea Sevcovicová; Barbara Sviezená; Eliska Gálová; Eva Miadoková
Journal:  Curr Genet       Date:  2007-11-09       Impact factor: 3.886

7.  Effect of N7-methylation on base pairing patterns of guanine: a DFT study.

Authors:  Swarnadeep Biswas; Pradeep Kumar Shukla
Journal:  J Mol Model       Date:  2021-05-25       Impact factor: 1.810

Review 8.  Insight into the cooperative DNA binding of the O⁶-alkylguanine DNA alkyltransferase.

Authors:  Ingrid Tessmer; Michael G Fried
Journal:  DNA Repair (Amst)       Date:  2014-02-16

9.  Repair of DNA Alkylation Damage by the Escherichia coli Adaptive Response Protein AlkB as Studied by ESI-TOF Mass Spectrometry.

Authors:  Deyu Li; James C Delaney; Charlotte M Page; Alvin S Chen; Cintyu Wong; Catherine L Drennan; John M Essigmann
Journal:  J Nucleic Acids       Date:  2010-10-27

Review 10.  Genome dynamics in major bacterial pathogens.

Authors:  Ole Herman Ambur; Tonje Davidsen; Stephan A Frye; Seetha V Balasingham; Karin Lagesen; Torbjørn Rognes; Tone Tønjum
Journal:  FEMS Microbiol Rev       Date:  2009-05       Impact factor: 16.408
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