Literature DB >> 25151136

Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism.

Kiruthika Selvadurai1, Pei Wang1, Joseph Seimetz1, Raven H Huang1.   

Abstract

Approximately 25% of cytoplasmic tRNAs in eukaryotic organisms have the wobble uridine (U34) modified at C5 through a process that, according to genetic studies, is carried out by the eukaryotic Elongator complex. Here we show that a single archaeal protein, the homolog of the third subunit of the eukaryotic Elongator complex (Elp3), is able to catalyze the same reaction. The mechanism of action by Elp3 described here represents unprecedented chemistry performed on acetyl-CoA.

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Year:  2014        PMID: 25151136      PMCID: PMC4479141          DOI: 10.1038/nchembio.1610

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  23 in total

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Journal:  J Biol Chem       Date:  2001-07-02       Impact factor: 5.157

2.  Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo.

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Authors:  Jae-Hyun Kim; William S Lane; Danny Reinberg
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-29       Impact factor: 11.205

5.  Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales.

Authors:  J A McCloskey; D E Graham; S Zhou; P F Crain; M Ibba; J Konisky; D Söll; G J Olsen
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

6.  Characterization of a six-subunit holo-elongator complex required for the regulated expression of a group of genes in Saccharomyces cerevisiae.

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Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

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Authors:  G Otero; J Fellows; Y Li; T de Bizemont; A M Dirac; C M Gustafsson; H Erdjument-Bromage; P Tempst; J Q Svejstrup
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Journal:  Mol Microbiol       Date:  2002-08       Impact factor: 3.501

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  43 in total

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2.  A comprehensive mechanistic model of iron metabolism in Saccharomyces cerevisiae.

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3.  Does Viperin Function as a Radical S-Adenosyl-l-methionine-dependent Enzyme in Regulating Farnesylpyrophosphate Synthase Expression and Activity?

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4.  Targeting of tail-anchored membrane proteins to subcellular organelles in Toxoplasma gondii.

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Review 5.  Elongator, a conserved complex required for wobble uridine modifications in eukaryotes.

Authors:  Tony Karlsborn; Hasan Tükenmez; A K M Firoj Mahmud; Fu Xu; Hao Xu; Anders S Byström
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

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7.  Glutaredoxin GRXS17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway.

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Review 8.  Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

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9.  Dimerization of elongator protein 1 is essential for Elongator complex assembly.

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Review 10.  Structural insights into the function of Elongator.

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Journal:  Cell Mol Life Sci       Date:  2018-01-13       Impact factor: 9.261

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