Literature DB >> 20580294

Optimizing gradient waveforms for microstructure sensitivity in diffusion-weighted MR.

Ivana Drobnjak1, Bernard Siow, Daniel C Alexander.   

Abstract

Variations in gradient waveforms can provide different levels of sensitivity to microstructure parameters in diffusion-weighted MR. We present a method that identifies gradient waveforms with maximal sensitivity to parameters of a model relating microstructural features to diffusion MR signals. The method optimizes the shape of the gradient waveform, constrained by hardware limits and fixed orientation, to minimize the expected variance of parameter estimates. The waveform is defined discretely and each point optimized independently. The method is illustrated with a biomedical application in which we maximize the sensitivity to microstructural features of white matter such as axon radius, intra-cellular volume fraction and diffusion constants. Simulation experiments find that optimization of the shape of the gradient waveform improves sensitivity to model parameters for both human and animal MR systems. In particular, the optimized waveforms make axon radii smaller than 5 microm more distinguishable than standard pulsed gradient spin-echo (PGSE). The identified class of optimized gradient waveforms have dominant square-wave components with frequency that increases as the radius size decreases. (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20580294     DOI: 10.1016/j.jmr.2010.05.017

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  29 in total

1.  Dynamics of local magnetization in the eigenbasis of the Bloch-Torrey operator.

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2.  High-gradient diffusion MRI reveals distinct estimates of axon diameter index within different white matter tracts in the in vivo human brain.

Authors:  Susie Y Huang; Qiyuan Tian; Qiuyun Fan; Thomas Witzel; Barbara Wichtmann; Jennifer A McNab; J Daniel Bireley; Natalya Machado; Eric C Klawiter; Choukri Mekkaoui; Lawrence L Wald; Aapo Nummenmaa
Journal:  Brain Struct Funct       Date:  2019-09-28       Impact factor: 3.270

3.  Diffusion-time dependence of diffusional kurtosis in the mouse brain.

Authors:  Manisha Aggarwal; Matthew D Smith; Peter A Calabresi
Journal:  Magn Reson Med       Date:  2020-02-05       Impact factor: 4.668

4.  Assessing the accuracy of using oscillating gradient spin echo sequences with AxCaliber to infer micron-sized axon diameters.

Authors:  Morgan Mercredi; Trevor J Vincent; Christopher P Bidinosti; Melanie Martin
Journal:  MAGMA       Date:  2016-07-13       Impact factor: 2.310

5.  Toward faster inference of micron-scale axon diameters using Monte Carlo simulations.

Authors:  Morgan Mercredi; Melanie Martin
Journal:  MAGMA       Date:  2018-03-07       Impact factor: 2.310

Review 6.  Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Authors:  Dmitry S Novikov; Els Fieremans; Sune N Jespersen; Valerij G Kiselev
Journal:  NMR Biomed       Date:  2018-10-15       Impact factor: 4.044

7.  Accurate noninvasive measurement of cell size and compartment shape anisotropy in yeast cells using double-pulsed field gradient MR.

Authors:  Noam Shemesh; Evren Özarslan; Peter J Basser; Yoram Cohen
Journal:  NMR Biomed       Date:  2011-07-22       Impact factor: 4.044

8.  Fast and robust measurement of microstructural dimensions using temporal diffusion spectroscopy.

Authors:  Hua Li; John C Gore; Junzhong Xu
Journal:  J Magn Reson       Date:  2014-02-19       Impact factor: 2.229

9.  The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter.

Authors:  Susie Y Huang; Aapo Nummenmaa; Thomas Witzel; Tanguy Duval; Julien Cohen-Adad; Lawrence L Wald; Jennifer A McNab
Journal:  Neuroimage       Date:  2014-12-09       Impact factor: 6.556

Review 10.  The role of tissue microstructure and water exchange in biophysical modelling of diffusion in white matter.

Authors:  Markus Nilsson; Danielle van Westen; Freddy Ståhlberg; Pia C Sundgren; Jimmy Lätt
Journal:  MAGMA       Date:  2013-02-27       Impact factor: 2.310

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