Literature DB >> 20571506

Genes predict village of origin in rural Europe.

Colm O'Dushlaine1, Ruth McQuillan, Michael E Weale, Daniel J M Crouch, Asa Johansson, Yurii Aulchenko, Christopher S Franklin, Ozren Polašek, Christian Fuchsberger, Aiden Corvin, Andrew A Hicks, Veronique Vitart, Caroline Hayward, Sarah H Wild, Thomas Meitinger, Cornelia M van Duijn, Ulf Gyllensten, Alan F Wright, Harry Campbell, Peter P Pramstaller, Igor Rudan, James F Wilson.   

Abstract

The genetic structure of human populations is important in population genetics, forensics and medicine. Using genome-wide scans and individuals with all four grandparents born in the same settlement, we here demonstrate remarkable geographical structure across 8-30  km in three different parts of rural Europe. After excluding close kin and inbreeding, village of origin could still be predicted correctly on the basis of genetic data for 89-100% of individuals.

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Year:  2010        PMID: 20571506      PMCID: PMC2987479          DOI: 10.1038/ejhg.2010.92

Source DB:  PubMed          Journal:  Eur J Hum Genet        ISSN: 1018-4813            Impact factor:   4.246


  11 in total

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Journal:  Am J Hum Genet       Date:  2008-08-28       Impact factor: 11.025

5.  Worldwide human relationships inferred from genome-wide patterns of variation.

Authors:  Jun Z Li; Devin M Absher; Hua Tang; Audrey M Southwick; Amanda M Casto; Sohini Ramachandran; Howard M Cann; Gregory S Barsh; Marcus Feldman; Luigi L Cavalli-Sforza; Richard M Myers
Journal:  Science       Date:  2008-02-22       Impact factor: 47.728

6.  Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.

Authors:  Chiara Sabatti; Susan K Service; Anna-Liisa Hartikainen; Anneli Pouta; Samuli Ripatti; Jae Brodsky; Chris G Jones; Noah A Zaitlen; Teppo Varilo; Marika Kaakinen; Ulla Sovio; Aimo Ruokonen; Jaana Laitinen; Eveliina Jakkula; Lachlan Coin; Clive Hoggart; Andrew Collins; Hannu Turunen; Stacey Gabriel; Paul Elliot; Mark I McCarthy; Mark J Daly; Marjo-Riitta Järvelin; Nelson B Freimer; Leena Peltonen
Journal:  Nat Genet       Date:  2008-12-07       Impact factor: 38.330

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Journal:  Nat Genet       Date:  2008-03-09       Impact factor: 38.330

9.  Population structure and eigenanalysis.

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Journal:  PLoS One       Date:  2009-05-08       Impact factor: 3.240

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  14 in total

1.  The Italian genome reflects the history of Europe and the Mediterranean basin.

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2.  North Africans traveling north.

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3.  Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity.

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Journal:  Eur J Hum Genet       Date:  2011-05-11       Impact factor: 4.246

4.  Fine-scale estimation of location of birth from genome-wide single-nucleotide polymorphism data.

Authors:  Clive J Hoggart; Paul F O'Reilly; Marika Kaakinen; Weihua Zhang; John C Chambers; Jaspal S Kooner; Lachlan J M Coin; Marjo-Riitta Jarvelin
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5.  Fine-scale human genetic structure in Western France.

Authors:  Matilde Karakachoff; Nicolas Duforet-Frebourg; Floriane Simonet; Solena Le Scouarnec; Nadine Pellen; Simon Lecointe; Eric Charpentier; Françoise Gros; Stéphane Cauchi; Philippe Froguel; Nane Copin; Thierry Le Tourneau; Vincent Probst; Hervé Le Marec; Sabrina Molinaro; Beverley Balkau; Richard Redon; Jean-Jacques Schott; Michael Gb Blum; Christian Dina
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6.  Tales the double helix tells.

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Journal:  Investig Genet       Date:  2010-09-01

7.  Cryptic distant relatives are common in both isolated and cosmopolitan genetic samples.

Authors:  Brenna M Henn; Lawrence Hon; J Michael Macpherson; Nick Eriksson; Serge Saxonov; Itsik Pe'er; Joanna L Mountain
Journal:  PLoS One       Date:  2012-04-03       Impact factor: 3.240

8.  Geographic population structure analysis of worldwide human populations infers their biogeographical origins.

Authors:  Eran Elhaik; Tatiana Tatarinova; Dmitri Chebotarev; Ignazio S Piras; Carla Maria Calò; Antonella De Montis; Manuela Atzori; Monica Marini; Sergio Tofanelli; Paolo Francalacci; Luca Pagani; Chris Tyler-Smith; Yali Xue; Francesco Cucca; Theodore G Schurr; Jill B Gaieski; Carlalynne Melendez; Miguel G Vilar; Amanda C Owings; Rocío Gómez; Ricardo Fujita; Fabrício R Santos; David Comas; Oleg Balanovsky; Elena Balanovska; Pierre Zalloua; Himla Soodyall; Ramasamy Pitchappan; Arunkumar Ganeshprasad; Michael Hammer; Lisa Matisoo-Smith; R Spencer Wells
Journal:  Nat Commun       Date:  2014-04-29       Impact factor: 14.919

9.  Anisotropic isolation by distance: the main orientations of human genetic differentiation.

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Journal:  Mol Biol Evol       Date:  2012-11-20       Impact factor: 16.240

10.  Global mobility and the break-up of human population isolates - neglected mechanisms in health, demographics, and anthropology.

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