Literature DB >> 20566886

Dissecting the THz spectrum of liquid water from first principles via correlations in time and space.

Matthias Heyden1, Jian Sun, Stefan Funkner, Gerald Mathias, Harald Forbert, Martina Havenith, Dominik Marx.   

Abstract

Solvation of molecules in water is at the heart of a myriad of molecular phenomena and of crucial importance to understanding such diverse issues as chemical reactivity or biomolecular function. Complementing well-established approaches, it has been shown that laser spectroscopy in the THz frequency domain offers new insights into hydration from small solutes to proteins. Upon introducing spatially-resolved analyses of the absorption cross section by simulations, the sensitivity of THz spectroscopy is traced back to characteristic distance-dependent modulations of absorption intensities for bulk water. The prominent peak at approximately 200 cm(-1) is dominated by first-shell dynamics, whereas a concerted motion involving the second solvation shell contributes most significantly to the absorption at about 80 cm(-1) approximately 2.4 THz. The latter can be understood in terms of an umbrella-like motion of two hydrogen-bonded tetrahedra along the connecting hydrogen bond axis. Thus, a modification of the hydrogen bond network, e.g., due to the presence of a solute, is expected to affect vibrational motion and THz absorption intensity at least on a length scale that corresponds to two layers of solvating water molecules. This result provides a molecular mechanism explaining the experimentally determined sensitivity of absorption changes in the THz domain in terms of distinct, solute-induced dynamical properties in solvation shells of (bio)molecules--even in the absence of well-defined resonances.

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Year:  2010        PMID: 20566886      PMCID: PMC2901429          DOI: 10.1073/pnas.0914885107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

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Authors:  P W Fenimore; H Frauenfelder; B H McMahon; F G Parak
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-20       Impact factor: 11.205

2.  Towards an assessment of the accuracy of density functional theory for first principles simulations of water. II.

Authors:  Eric Schwegler; Jeffrey C Grossman; Francois Gygi; Giulia Galli
Journal:  J Chem Phys       Date:  2004-09-15       Impact factor: 3.488

Review 3.  Dynamics of water in biological recognition.

Authors:  Samir Kumar Pal; Ahmed H Zewail
Journal:  Chem Rev       Date:  2004-04       Impact factor: 60.622

4.  Simulations of the role of water in the protein-folding mechanism.

Authors:  Young Min Rhee; Eric J Sorin; Guha Jayachandran; Erik Lindahl; Vijay S Pande
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-16       Impact factor: 11.205

5.  Polarizable molecules in the vibrational spectroscopy of water.

Authors:  Edward Harder; Joel D Eaves; Andrei Tokmakoff; B J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-04       Impact factor: 11.205

6.  Hydration-induced far-infrared absorption increase in myoglobin.

Authors:  Chenfeng Zhang; Stephen M Durbin
Journal:  J Phys Chem B       Date:  2006-11-23       Impact factor: 2.991

Review 7.  Applications of terahertz spectroscopy in biosystems.

Authors:  David F Plusquellic; Karen Siegrist; Edwin J Heilweil; Okan Esenturk
Journal:  Chemphyschem       Date:  2007-12-03       Impact factor: 3.102

8.  An extended dynamical hydration shell around proteins.

Authors:  Simon Ebbinghaus; Seung Joong Kim; Matthias Heyden; Xin Yu; Udo Heugen; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

9.  The effects of dissolved halide anions on hydrogen bonding in liquid water.

Authors:  Jared D Smith; Richard J Saykally; Phillip L Geissler
Journal:  J Am Chem Soc       Date:  2007-10-25       Impact factor: 15.419

10.  Development of transferable interaction potentials for water. V. Extension of the flexible, polarizable, Thole-type model potential (TTM3-F, v. 3.0) to describe the vibrational spectra of water clusters and liquid water.

Authors:  George S Fanourgakis; Sotiris S Xantheas
Journal:  J Chem Phys       Date:  2008-02-21       Impact factor: 3.488

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  50 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-02       Impact factor: 11.205

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Journal:  Eur Biophys J       Date:  2011-06-30       Impact factor: 1.733

3.  Long-range protein-water dynamics in hyperactive insect antifreeze proteins.

Authors:  Konrad Meister; Simon Ebbinghaus; Yao Xu; John G Duman; Arthur DeVries; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

4.  Hydrogen Bond Network of Water around Protein Investigated with Terahertz and Infrared Spectroscopy.

Authors:  Keiichiro Shiraga; Yuichi Ogawa; Naoshi Kondo
Journal:  Biophys J       Date:  2016-12-20       Impact factor: 4.033

Review 5.  Continuous noninvasive glucose monitoring; water as a relevant marker of glucose uptake in vivo.

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Journal:  Biophys Rev       Date:  2019-11-18

6.  Correlated structural kinetics and retarded solvent dynamics at the metalloprotease active site.

Authors:  Moran Grossman; Benjamin Born; Matthias Heyden; Dmitry Tworowski; Gregg B Fields; Irit Sagi; Martina Havenith
Journal:  Nat Struct Mol Biol       Date:  2011-09-18       Impact factor: 15.369

7.  Do hydration dynamics follow the structural perturbation during thermal denaturation of a protein: a terahertz absorption study.

Authors:  Trung Quan Luong; Pramod Kumar Verma; Rajib Kumar Mitra; Martina Havenith
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

8.  Molecular Structure and Modeling of Water-Air and Ice-Air Interfaces Monitored by Sum-Frequency Generation.

Authors:  Fujie Tang; Tatsuhiko Ohto; Shumei Sun; Jérémy R Rouxel; Sho Imoto; Ellen H G Backus; Shaul Mukamel; Mischa Bonn; Yuki Nagata
Journal:  Chem Rev       Date:  2020-03-06       Impact factor: 60.622

Review 9.  Quantitative cw Overhauser effect dynamic nuclear polarization for the analysis of local water dynamics.

Authors:  John M Franck; Anna Pavlova; John A Scott; Songi Han
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-07-04       Impact factor: 9.795

10.  Structural and spectroscopic properties of water around small hydrophobic solutes.

Authors:  Maria Montagna; Fabio Sterpone; Leonardo Guidoni
Journal:  J Phys Chem B       Date:  2012-09-18       Impact factor: 2.991

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