Literature DB >> 20552215

Genetic profile characterization of 10 X-STRs in four populations of the southeastern region of Brazil.

Joyce A Martins1, Jeane C Costa, Greiciane G Paneto, Raquel F Figueiredo, Leonor Gusmão, Paula Sánchez-Diz, Angel Carracedo, Regina M B Cicarelli.   

Abstract

Ten X-chromosomal short tandem repeats (DXS8378, DXS9902, DXS7132, DXS9898, DXS6809, DXS6789, DXS7133, GATA172D05, GATA31E08 and DXS7423) were analyzed in four populations of the southeastern region of Brazil (São Paulo, Rio de Janeiro, Vitória and Belo Horizonte). No deviations from the Hardy-Weinberg equilibrium were observed for any of the analyzed loci in the four populations. The average diversity per locus varied between 68% for DXS8378, DXS7133, and DXS7423 and 83%, for DXS6809, with Rio de Janeiro being the most diverse population. Overall power of discrimination values in females varied between 0.99999999990 and 0.99999999997 and between 0.9999991 and 0.9999995 in males. These high values show the potential of this system for forensic application and relationships' testing in the studied groups. Genetic comparisons (exact tests of population differentiation and pairwise genetic distances) revealed significant differences between Brazilian and other populations from Europe, Latin America and Africa, as well as among different Brazilian populations.

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Year:  2010        PMID: 20552215     DOI: 10.1007/s00414-010-0478-9

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  19 in total

1.  Haplotype diversity of 17 Y-chromosome STRs in Brazilians.

Authors:  Rinaldo W Pereira; Erika H G Monteiro; Gabriela C R Hirschfeld; Alexandre Y Wang; Dario Grattapaglia
Journal:  Forensic Sci Int       Date:  2006-07-25       Impact factor: 2.395

2.  Genetic population data of 12 STR loci of the PowerPlex Y system in the state of São Paulo population (Southeast of Brazil).

Authors:  C C Góis; J A Martins; G A Pereira; A Freschi; G G Paneto; V L S Alvarenga; R M B Cicarelli; M H Hirata; R N Oliveira
Journal:  Forensic Sci Int       Date:  2007-04-11       Impact factor: 2.395

3.  Genetic data of four X-chromosomal STRs in a population sample of Santa Catarina, Brazil.

Authors:  Laura M Cainé; Lurdes Pontes; David Abrantes; Gabriela Lima; Fátima Pinheiro
Journal:  J Forensic Sci       Date:  2007-03       Impact factor: 1.832

Review 4.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

5.  A GEP-ISFG collaborative study on the optimization of an X-STR decaplex: data on 15 Iberian and Latin American populations.

Authors:  Leonor Gusmão; Paula Sánchez-Diz; Cíntia Alves; Iva Gomes; María Teresa Zarrabeitia; Mariel Abovich; Ivannia Atmetlla; Cecilia Bobillo; Luisa Bravo; Juan Builes; Laura Cainé; Raquel Calvo; Elizeu Carvalho; Mónica Carvalho; Regina Cicarelli; Laura Catelli; Daniel Corach; Marta Espinoza; Oscar García; Marcelo Malaghini; Joyce Martins; Fátima Pinheiro; Maria João Porto; Eduardo Raimondi; Jose Antonio Riancho; Amelia Rodríguez; Anayanci Rodríguez; Belén Rodríguez Cardozo; Vicente Schneider; Sandra Silva; Celso Tavares; Ulises Toscanini; Carlos Vullo; Martin Whittle; Iñaki Yurrebaso; Angel Carracedo; António Amorim
Journal:  Int J Legal Med       Date:  2008-12-12       Impact factor: 2.686

6.  A multiplex PCR for 11 X chromosome STR markers and population data from a Brazilian Amazon Region.

Authors:  Elzemar Martins Ribeiro Rodrigues; Fabio Pereira das Neves Leite; Mara Helena Hutz; Teresinha de Jesus Brabo Ferreira Palha; Andrea Kely Campos Ribeiro dos Santos; Sidney Emanuel Batista dos Santos
Journal:  Forensic Sci Int Genet       Date:  2007-12-04       Impact factor: 4.882

7.  Linkage disequilibrium patterns and genetic structure of Amerindian and non-Amerindian Brazilian populations revealed by long-range X-STR markers.

Authors:  Fabio P N Leite; Sidney E B Santos; Elzemar M R Rodríguez; Sidia M Callegari-Jacques; Dario A Demarchi; Luiza T Tsuneto; M Luiza Petzl-Erler; Francisco M Salzano; Mara H Hutz
Journal:  Am J Phys Anthropol       Date:  2009-07       Impact factor: 2.868

8.  The Karimojong from Uganda: genetic characterization using an X-STR decaplex system.

Authors:  Iva Gomes; Vânia Pereira; Verónica Gomes; Maria João Prata; Nádia Pinto; Angel Carracedo; António Amorim; Leonor Gusmão
Journal:  Forensic Sci Int Genet       Date:  2008-12-19       Impact factor: 4.882

9.  Development of two multiplex PCR systems for the analysis of 12 X-chromosomal STR loci in a northwestern Italian population sample.

Authors:  C Robino; A Giolitti; S Gino; C Torre
Journal:  Int J Legal Med       Date:  2006-07-22       Impact factor: 2.686

10.  Analysis of 10 X-STRs in three African populations.

Authors:  Iva Gomes; Cíntia Alves; Karina Maxzud; Rui Pereira; Maria João Prata; Paula Sánchez-Diz; Angel Carracedo; António Amorim; Leonor Gusmão
Journal:  Forensic Sci Int Genet       Date:  2007-03-06       Impact factor: 4.882

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  5 in total

1.  Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

Authors:  Larissa Siqueira Penna; Fernanda Gamio Silva; Patricia Hartstein Salim; Gisele Ewald; Mariana Jobim; José Antônio de Azevedo Magalhães; Luiz Fernando Jobim
Journal:  Int J Legal Med       Date:  2011-10-15       Impact factor: 2.686

2.  Extensive survey of 12 X-STRs reveals genetic heterogeneity among Brazilian populations.

Authors:  Elzemar Martins Ribeiro-Rodrigues; Teresinha de Jesus Brabo Ferreira Palha; Eloisa Auler Bittencourt; Andrea Ribeiro-Dos-Santos; Sidney Santos
Journal:  Int J Legal Med       Date:  2011-03-15       Impact factor: 2.686

3.  Genetic characterization of an X-STR decaplex system in the State of Mato Grosso, Brazil: distribution, forensic efficiency and population structure.

Authors:  Joyce A Martins; Denise P Martins; Camila I F Oliveira-Brancati; Juliana Martinez; Regina M B Cicarelli; Dorotéia R S Souza
Journal:  Int J Legal Med       Date:  2017-04-12       Impact factor: 2.686

4.  Genetic profile characterization of ten X-STRs in a sample from Paraná, Brazil.

Authors:  Luciellen d'Avila Giacomel Kobachuk; Marcelo Malaghini; José Samuel da Silva; Leonor Gusmão; Maria da Graça Bicalho
Journal:  Int J Legal Med       Date:  2012-07-20       Impact factor: 2.686

5.  Brazilian genetic database of chromosome X.

Authors:  Joyce Aparecida Martins; Bárbara Kawamura; Alexandre Eduardo Cardoso; Regina Maria Barretto Cicarelli
Journal:  Mol Biol Rep       Date:  2014-02-26       Impact factor: 2.316

  5 in total

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