Literature DB >> 19170209

Linkage disequilibrium patterns and genetic structure of Amerindian and non-Amerindian Brazilian populations revealed by long-range X-STR markers.

Fabio P N Leite1, Sidney E B Santos, Elzemar M R Rodríguez, Sidia M Callegari-Jacques, Dario A Demarchi, Luiza T Tsuneto, M Luiza Petzl-Erler, Francisco M Salzano, Mara H Hutz.   

Abstract

The extent of X-chromosome linkage disequilibrium (LD) was studied in a southern Brazilian population, and in a pool of samples from Amerindian populations. For this purpose, 11 microsatellites, located mostly in a Xq region comprising approximately 86 Mb was investigated. The lower Amerindian gene diversity associated with significant differences between the populations studied indicated population structure as the main cause for the higher LD values in the Amerindian pool. On the other hand, the LD levels of the non-Amerindian Brazilian sample, although less extensive than that of the Amerindians, were probably determined by admixture events. Our results indicated that different demographic histories have significant effects on LD levels of human populations, and provide a first approach to the X-chromosome ancestry of Amerindian and non-Amerindian Brazilian populations, being valuable for future studies involving mapping and population genetic studies.

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Year:  2009        PMID: 19170209     DOI: 10.1002/ajpa.20998

Source DB:  PubMed          Journal:  Am J Phys Anthropol        ISSN: 0002-9483            Impact factor:   2.868


  6 in total

1.  Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

Authors:  Larissa Siqueira Penna; Fernanda Gamio Silva; Patricia Hartstein Salim; Gisele Ewald; Mariana Jobim; José Antônio de Azevedo Magalhães; Luiz Fernando Jobim
Journal:  Int J Legal Med       Date:  2011-10-15       Impact factor: 2.686

2.  Genetic profile characterization of 10 X-STRs in four populations of the southeastern region of Brazil.

Authors:  Joyce A Martins; Jeane C Costa; Greiciane G Paneto; Raquel F Figueiredo; Leonor Gusmão; Paula Sánchez-Diz; Angel Carracedo; Regina M B Cicarelli
Journal:  Int J Legal Med       Date:  2010-06-16       Impact factor: 2.686

3.  Extensive survey of 12 X-STRs reveals genetic heterogeneity among Brazilian populations.

Authors:  Elzemar Martins Ribeiro-Rodrigues; Teresinha de Jesus Brabo Ferreira Palha; Eloisa Auler Bittencourt; Andrea Ribeiro-Dos-Santos; Sidney Santos
Journal:  Int J Legal Med       Date:  2011-03-15       Impact factor: 2.686

4.  Prevalence of common α-thalassemia determinants in south Brazil: Importance for the diagnosis of microcytic anemia.

Authors:  Sandrine C Wagner; Simone M de Castro; Tatiana P Gonzalez; Ana P Santin; Leticia Filippon; Carina F Zaleski; Laura A Azevedo; Bruna Amorin; Sidia M Callegari-Jacques; Mara H Hutz
Journal:  Genet Mol Biol       Date:  2010-12-01       Impact factor: 1.771

5.  Distribution of CYP2D6 alleles and phenotypes in the Brazilian population.

Authors:  Deise C Friedrich; Júlia P Genro; Vinicius A Sortica; Guilherme Suarez-Kurtz; Maria Elizabete de Moraes; Sergio D J Pena; Andrea K Ribeiro dos Santos; Marco A Romano-Silva; Mara H Hutz
Journal:  PLoS One       Date:  2014-10-20       Impact factor: 3.240

6.  Deletional Alpha-Thalassemia Alleles in Amazon Blood Donors.

Authors:  Fernanda Cozendey Anselmo; Natália Santos Ferreira; Adolfo José da Mota; Marilda de Souza Gonçalves; Sérgio Roberto Lopes Albuquerque; Nelson Abrahim Fraiji; Ana Carla Dantas Ferreira; José Pereira de Moura Neto
Journal:  Adv Hematol       Date:  2020-04-14
  6 in total

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