Literature DB >> 19647697

The Karimojong from Uganda: genetic characterization using an X-STR decaplex system.

Iva Gomes1, Vânia Pereira, Verónica Gomes, Maria João Prata, Nádia Pinto, Angel Carracedo, António Amorim, Leonor Gusmão.   

Abstract

The Karimojong, an African group from the Karamoja region of Northeast Uganda, were genetically analysed using a decaplex system for X chromosome short tandem repeats (X-STRs). A total of 255 individuals (117 males and 138 females) were genotyped for the following loci: DXS8378, DXS9898, DXS7133, GATA31E08, GATA172D05, DXS7423, DXS6809, DXS7132, DXS9902 and DXS6789. Allele frequencies and parameters for forensic evaluation were calculated for each STR. No association was found between any pairs of loci studied. DXS6789 was the most polymorphic marker in this sample, followed by DXS6809, with gene diversities of 84.79% and 83.94%, respectively. The less discriminating locus observed was DXS7133, with a gene diversity of 39.79%. High overall values of power of discrimination were obtained for female (1 in 1.8 x 10(10)) and male samples (1 in 1.6 x 10(6)), as well as high power of exclusion in father/mother/daughter trios (99.9997%), in father daughter duos (99.9862%) and in half sisters with same father (99.0331%). These results confirm the potential of this 10-plex in parentage testing and in human identification.

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Year:  2008        PMID: 19647697     DOI: 10.1016/j.fsigen.2008.10.009

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  7 in total

1.  Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

Authors:  Larissa Siqueira Penna; Fernanda Gamio Silva; Patricia Hartstein Salim; Gisele Ewald; Mariana Jobim; José Antônio de Azevedo Magalhães; Luiz Fernando Jobim
Journal:  Int J Legal Med       Date:  2011-10-15       Impact factor: 2.686

2.  Allele frequencies of 11 X-chromosomal loci of two population samples from Africa.

Authors:  Micaela Poetsch; Alexander Knop; Daniela El-Mostaqim; Noel Rakotomavo; Nicole von Wurmb-Schwark
Journal:  Int J Legal Med       Date:  2011-03       Impact factor: 2.686

3.  Genetic profile characterization of 10 X-STRs in four populations of the southeastern region of Brazil.

Authors:  Joyce A Martins; Jeane C Costa; Greiciane G Paneto; Raquel F Figueiredo; Leonor Gusmão; Paula Sánchez-Diz; Angel Carracedo; Regina M B Cicarelli
Journal:  Int J Legal Med       Date:  2010-06-16       Impact factor: 2.686

4.  X-linked insertion/deletion polymorphisms: forensic applications of a 33-markers panel.

Authors:  Natalle S C Freitas; Rafael L Resque; Elzemar M Ribeiro-Rodrigues; João F Guerreiro; Ney P C Santos; Andrea Ribeiro-dos-Santos; Sidney Santos
Journal:  Int J Legal Med       Date:  2010-03-31       Impact factor: 2.686

5.  Genetic characterization of an X-STR decaplex system in the State of Mato Grosso, Brazil: distribution, forensic efficiency and population structure.

Authors:  Joyce A Martins; Denise P Martins; Camila I F Oliveira-Brancati; Juliana Martinez; Regina M B Cicarelli; Dorotéia R S Souza
Journal:  Int J Legal Med       Date:  2017-04-12       Impact factor: 2.686

6.  X-STR decaplex study on the population of Czech Republic.

Authors:  Anastassiya Zidkova; Pavla Coufalova; Pavel Capek
Journal:  Int J Legal Med       Date:  2013-04-26       Impact factor: 2.686

7.  Evaluation of DXS9902, DXS7132, DXS6809, DXS7133, and DXS7423 in humans and chimpanzees: sequence variation, repeat structure, and nomenclature.

Authors:  Iva Gomes; Rui Pereira; Wolfgang R Mayr; António Amorim; Angel Carracedo; Leonor Gusmão
Journal:  Int J Legal Med       Date:  2009-06-18       Impact factor: 2.686

  7 in total

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