Literature DB >> 20549732

Regulation of vertebrate embryogenesis by the exon junction complex core component Eif4a3.

Tomomi Haremaki1, Jyotsna Sridharan, Shira Dvora, Daniel C Weinstein.   

Abstract

The establishment and maintenance of cellular identity are ultimately dependent upon the accurate regulation of gene expression, the process by which genetic information is used to synthesize functional gene products. The post-transcriptional, pre-translational regulation of RNA constitutes RNA processing, which plays a prominent role in the modulation of gene expression in differentiated animal cells. The multi-protein Exon Junction Complex (EJC) serves as a critical signaling hub within the network that underlies many RNA processing events. Here, we identify a requirement for the EJC during early vertebrate embryogenesis. Knockdown of the EJC component Eukaryotic initiation factor 4a3 (Eif4a3) in embryos of the frog Xenopus laevis results in full-body paralysis, with defects in sensory neuron, pigment cell, and cardiac development; similar phenotypes are seen following knockdown of other "core" EJC protein constituents. Our studies point to an essential role for the EJC in the development of neural plate border derivatives. (c) 2010 Wiley-Liss, Inc.

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Year:  2010        PMID: 20549732      PMCID: PMC2922852          DOI: 10.1002/dvdy.22330

Source DB:  PubMed          Journal:  Dev Dyn        ISSN: 1058-8388            Impact factor:   3.780


  35 in total

1.  Spatial and temporal patterns of cell division during early Xenopus embryogenesis.

Authors:  Y Saka; J C Smith
Journal:  Dev Biol       Date:  2001-01-15       Impact factor: 3.582

2.  The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions.

Authors:  H Le Hir; E Izaurralde; L E Maquat; M J Moore
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

3.  Relationship between gene expression domains of Xsnail, Xslug, and Xtwist and cell movement in the prospective neural crest of Xenopus.

Authors:  C Linker; M Bronner-Fraser; R Mayor
Journal:  Dev Biol       Date:  2000-08-15       Impact factor: 3.582

Review 4.  Early functional organization of spinal neurons in developing lower vertebrates.

Authors:  A Roberts
Journal:  Brain Res Bull       Date:  2000-11-15       Impact factor: 4.077

Review 5.  Pre-mRNA processing reaches back to transcription and ahead to translation.

Authors:  Melissa J Moore; Nick J Proudfoot
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

6.  Confocal imaging of early heart development in Xenopus laevis.

Authors:  S J Kolker; U Tajchman; D L Weeks
Journal:  Dev Biol       Date:  2000-02-01       Impact factor: 3.582

Review 7.  eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation.

Authors:  A C Gingras; B Raught; N Sonenberg
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

8.  Xenopus Six1 gene is expressed in neurogenic cranial placodes and maintained in the differentiating lateral lines.

Authors:  P D Pandur; S A Moody
Journal:  Mech Dev       Date:  2000-09       Impact factor: 1.882

9.  Isolation and developmental expression of tyrosinase family genes in Xenopus laevis.

Authors:  Mayuko Kumasaka; Shigeru Sato; Ichiro Yajima; Hiroaki Yamamoto
Journal:  Pigment Cell Res       Date:  2003-10

10.  Delta/Notch signaling promotes formation of zebrafish neural crest by repressing Neurogenin 1 function.

Authors:  Robert A Cornell; Judith S Eisen
Journal:  Development       Date:  2002-06       Impact factor: 6.868

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  12 in total

1.  A conserved microRNA/NMD regulatory circuit controls gene expression.

Authors:  Rachid Karam; Miles Wilkinson
Journal:  RNA Biol       Date:  2012-01-01       Impact factor: 4.652

Review 2.  The exon junction complex as a node of post-transcriptional networks.

Authors:  Hervé Le Hir; Jérôme Saulière; Zhen Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-16       Impact factor: 94.444

3.  EIF4A3 deficient human iPSCs and mouse models demonstrate neural crest defects that underlie Richieri-Costa-Pereira syndrome.

Authors:  Emily E Miller; Gerson S Kobayashi; Camila M Musso; Miranda Allen; Felipe A A Ishiy; Luiz Carlos de Caires; Ernesto Goulart; Karina Griesi-Oliveira; Roseli M Zechi-Ceide; Antonio Richieri-Costa; Debora R Bertola; Maria Rita Passos-Bueno; Debra L Silver
Journal:  Hum Mol Genet       Date:  2017-06-15       Impact factor: 6.150

4.  CLIP-seq of eIF4AIII reveals transcriptome-wide mapping of the human exon junction complex.

Authors:  Jérôme Saulière; Valentine Murigneux; Zhen Wang; Emélie Marquenet; Isabelle Barbosa; Olivier Le Tonquèze; Yann Audic; Luc Paillard; Hugues Roest Crollius; Hervé Le Hir
Journal:  Nat Struct Mol Biol       Date:  2012-10-21       Impact factor: 15.369

5.  Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay.

Authors:  Ivone G Bruno; Rachid Karam; Lulu Huang; Anjana Bhardwaj; Chih H Lou; Eleen Y Shum; Hye-Won Song; Mark A Corbett; Wesley D Gifford; Jozef Gecz; Samuel L Pfaff; Miles F Wilkinson
Journal:  Mol Cell       Date:  2011-05-20       Impact factor: 17.970

6.  The EJC component Magoh regulates proliferation and expansion of neural crest-derived melanocytes.

Authors:  Debra L Silver; Karen E Leeds; Hun-Way Hwang; Emily E Miller; William J Pavan
Journal:  Dev Biol       Date:  2013-01-18       Impact factor: 3.582

7.  Eif4a3 is required for accurate splicing of the Xenopus laevis ryanodine receptor pre-mRNA.

Authors:  Tomomi Haremaki; Daniel C Weinstein
Journal:  Dev Biol       Date:  2012-08-28       Impact factor: 3.582

8.  A noncoding expansion in EIF4A3 causes Richieri-Costa-Pereira syndrome, a craniofacial disorder associated with limb defects.

Authors:  Francine P Favaro; Lucas Alvizi; Roseli M Zechi-Ceide; Debora Bertola; Temis M Felix; Josiane de Souza; Salmo Raskin; Stephen R F Twigg; Andrea M J Weiner; Pablo Armas; Ezequiel Margarit; Nora B Calcaterra; Gregers R Andersen; Simon J McGowan; Andrew O M Wilkie; Antonio Richieri-Costa; Maria L G de Almeida; Maria Rita Passos-Bueno
Journal:  Am J Hum Genet       Date:  2013-12-19       Impact factor: 11.025

9.  Compound inheritance of a low-frequency regulatory SNP and a rare null mutation in exon-junction complex subunit RBM8A causes TAR syndrome.

Authors:  Cornelis A Albers; Dirk S Paul; Harald Schulze; Kathleen Freson; Jonathan C Stephens; Peter A Smethurst; Jennifer D Jolley; Ana Cvejic; Myrto Kostadima; Paul Bertone; Martijn H Breuning; Najet Debili; Panos Deloukas; Rémi Favier; Janine Fiedler; Catherine M Hobbs; Ni Huang; Matthew E Hurles; Graham Kiddle; Ingrid Krapels; Paquita Nurden; Claudia A L Ruivenkamp; Jennifer G Sambrook; Kenneth Smith; Derek L Stemple; Gabriele Strauss; Chantal Thys; Chris van Geet; Ruth Newbury-Ecob; Willem H Ouwehand; Cedric Ghevaert
Journal:  Nat Genet       Date:  2012-02-26       Impact factor: 38.330

10.  Thrombocytopenia-absent radius (TAR) syndrome due to compound inheritance for a 1q21.1 microdeletion and a low-frequency noncoding RBM8A SNP: a new familial case.

Authors:  Elisa Tassano; Stefania Gimelli; Maria Teresa Divizia; Margherita Lerone; Carlotta Vaccari; Aldamaria Puliti; Giorgio Gimelli
Journal:  Mol Cytogenet       Date:  2015-11-05       Impact factor: 2.009

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