Literature DB >> 22944195

Eif4a3 is required for accurate splicing of the Xenopus laevis ryanodine receptor pre-mRNA.

Tomomi Haremaki1, Daniel C Weinstein.   

Abstract

The Exon Junction Complex (EJC) plays a critical role in multiple posttranscriptional events, including RNA subcellular localization, nonsense-mediated decay (NMD), and translation. We previously reported that knockdown of the EJC core component Eukaryotic initiation factor 4a3 (Eif4a3) results in full-body paralysis of embryos of the frog, Xenopus laevis. Here, we explore the cellular and molecular mechanisms underlying this phenotype. We find that cultured muscle cells derived from Eif4a3 morphants do not contract, and fail to undergo calcium-dependent calcium release in response to electrical stimulation or treatment with caffeine. We show that ryr (ryanodine receptor) transcripts are incorrectly spliced in Eif4a3 morphants, and demonstrate that inhibition of Xenopus Ryr function similarly results in embryonic paralysis. These results suggest that the EJC mediates muscle cell function via regulation of pre-mRNA splicing during early vertebrate embryogenesis.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22944195      PMCID: PMC3479368          DOI: 10.1016/j.ydbio.2012.08.013

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  27 in total

1.  The exon junction core complex is locked onto RNA by inhibition of eIF4AIII ATPase activity.

Authors:  Lionel Ballut; Brice Marchadier; Aurélie Baguet; Catherine Tomasetto; Bertrand Séraphin; Hervé Le Hir
Journal:  Nat Struct Mol Biol       Date:  2005-09-18       Impact factor: 15.369

2.  Caffeine - a valuable tool in excitation-contraction coupling research.

Authors:  D George Stephenson
Journal:  J Physiol       Date:  2007-12-06       Impact factor: 5.182

Review 3.  Modulation of the ryanodine receptor and intracellular calcium.

Authors:  Ran Zalk; Stephan E Lehnart; Andrew R Marks
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

Review 4.  Pre-mRNA processing reaches back to transcription and ahead to translation.

Authors:  Melissa J Moore; Nick J Proudfoot
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

5.  Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators.

Authors:  Laetitia Michelle; Alexandre Cloutier; Johanne Toutant; Lulzim Shkreta; Philippe Thibault; Mathieu Durand; Daniel Garneau; Daniel Gendron; Elvy Lapointe; Sonia Couture; Hervé Le Hir; Roscoe Klinck; Sherif Abou Elela; Panagiotis Prinos; Benoit Chabot
Journal:  Mol Cell Biol       Date:  2011-12-27       Impact factor: 4.272

6.  The poly(rC)-binding protein alphaCP2 is a noncanonical factor in X. laevis cytoplasmic polyadenylation.

Authors:  Melanie R Vishnu; Marina Sumaroka; Peter S Klein; Stephen A Liebhaber
Journal:  RNA       Date:  2011-03-28       Impact factor: 4.942

7.  Regulation of vertebrate embryogenesis by the exon junction complex core component Eif4a3.

Authors:  Tomomi Haremaki; Jyotsna Sridharan; Shira Dvora; Daniel C Weinstein
Journal:  Dev Dyn       Date:  2010-07       Impact factor: 3.780

8.  The exon junction complex controls the splicing of MAPK and other long intron-containing transcripts in Drosophila.

Authors:  Dariel Ashton-Beaucage; Christian M Udell; Hugo Lavoie; Caroline Baril; Martin Lefrançois; Pierre Chagnon; Patrick Gendron; Olivier Caron-Lizotte; Eric Bonneil; Pierre Thibault; Marc Therrien
Journal:  Cell       Date:  2010-10-15       Impact factor: 41.582

9.  Exon junction complex subunits are required to splice Drosophila MAP kinase, a large heterochromatic gene.

Authors:  Jean-Yves Roignant; Jessica E Treisman
Journal:  Cell       Date:  2010-10-15       Impact factor: 41.582

10.  An Ryr1I4895T mutation abolishes Ca2+ release channel function and delays development in homozygous offspring of a mutant mouse line.

Authors:  Elena Zvaritch; Frederic Depreux; Natasha Kraeva; Ryan E Loy; Sanjeewa A Goonasekera; Simona Boncompagni; Simona Boncompagi; Alexander Kraev; Anthony O Gramolini; Robert T Dirksen; Clara Franzini-Armstrong; Christine E Seidman; J G Seidman; David H Maclennan
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

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  8 in total

Review 1.  The exon junction complex as a node of post-transcriptional networks.

Authors:  Hervé Le Hir; Jérôme Saulière; Zhen Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-16       Impact factor: 94.444

2.  EIF4A3 deficient human iPSCs and mouse models demonstrate neural crest defects that underlie Richieri-Costa-Pereira syndrome.

Authors:  Emily E Miller; Gerson S Kobayashi; Camila M Musso; Miranda Allen; Felipe A A Ishiy; Luiz Carlos de Caires; Ernesto Goulart; Karina Griesi-Oliveira; Roseli M Zechi-Ceide; Antonio Richieri-Costa; Debora R Bertola; Maria Rita Passos-Bueno; Debra L Silver
Journal:  Hum Mol Genet       Date:  2017-06-15       Impact factor: 6.150

3.  An exon junction complex-independent function of Barentsz in neuromuscular synapse growth.

Authors:  Cheuk Hei Ho; Chiara Paolantoni; Praveen Bawankar; Zuojian Tang; Stuart Brown; Jean-Yves Roignant; Jessica E Treisman
Journal:  EMBO Rep       Date:  2021-11-02       Impact factor: 8.807

4.  The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript.

Authors:  Colin D Malone; Claire Mestdagh; Junaid Akhtar; Nastasja Kreim; Pia Deinhard; Ravi Sachidanandam; Jessica Treisman; Jean-Yves Roignant
Journal:  Genes Dev       Date:  2014-08-07       Impact factor: 11.361

5.  Transcriptome-wide modulation of splicing by the exon junction complex.

Authors:  Zhen Wang; Valentine Murigneux; Hervé Le Hir
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

6.  Haploinsufficiency for Core Exon Junction Complex Components Disrupts Embryonic Neurogenesis and Causes p53-Mediated Microcephaly.

Authors:  Hanqian Mao; John J McMahon; Yi-Hsuan Tsai; Zefeng Wang; Debra L Silver
Journal:  PLoS Genet       Date:  2016-09-12       Impact factor: 5.917

7.  SOX9 has distinct regulatory roles in alternative splicing and transcription.

Authors:  Michael Girardot; Elsa Bayet; Justine Maurin; Philippe Fort; Pierre Roux; Peggy Raynaud
Journal:  Nucleic Acids Res       Date:  2018-09-28       Impact factor: 16.971

8.  Large-Scale Profiling of RBP-circRNA Interactions from Public CLIP-Seq Datasets.

Authors:  Minzhe Zhang; Tao Wang; Guanghua Xiao; Yang Xie
Journal:  Genes (Basel)       Date:  2020-01-03       Impact factor: 4.141

  8 in total

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