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Literature DB >> 23087235

Systems biology. How information theory handles cell signaling and uncertainty.

Matthew D Brennan¹, Raymond Cheong, Andre Levchenko.

Abstract

Entities: Gene Species

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Year: 2012 PMID： 23087235 PMCID： PMC3820285 DOI： 10.1126/science.1227946

Source DB: PubMed Journal: Science ISSN： 0036-8075 Impact factor: 47.728

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20 in total

Review 1. Information theory and neural coding.

Authors: A Borst; F E Theunissen
Journal: Nat Neurosci Date: 1999-11 Impact factor: 24.884

2. Intrinsic noise in gene regulatory networks.

Authors: M Thattai; A van Oudenaarden
Journal: Proc Natl Acad Sci U S A Date: 2001-07-03 Impact factor: 11.205

Review 3. Network biology: understanding the cell's functional organization.

Authors: Albert-László Barabási; Zoltán N Oltvai
Journal: Nat Rev Genet Date: 2004-02 Impact factor: 53.242

4. Enhancement of cellular memory by reducing stochastic transitions.

Authors: Murat Acar; Attila Becskei; Alexander van Oudenaarden
Journal: Nature Date: 2005-05-12 Impact factor: 49.962

5. Information flow and optimization in transcriptional regulation.

Authors: Gasper Tkacik; Curtis G Callan; William Bialek
Journal: Proc Natl Acad Sci U S A Date: 2008-08-21 Impact factor: 11.205

Review 6. Stochasticity and cell fate.

Authors: Richard Losick; Claude Desplan
Journal: Science Date: 2008-04-04 Impact factor: 47.728

Review 7. Information theory based approaches to cellular signaling.

Authors: Christian Waltermann; Edda Klipp
Journal: Biochim Biophys Acta Date: 2011-07-23

8. Multiplexing biochemical signals.

Authors: Wiet de Ronde; Filipe Tostevin; Pieter Rein ten Wolde
Journal: Phys Rev Lett Date: 2011-07-19 Impact factor: 9.161

9. Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics.

Authors: Alessandro Pandini; Arianna Fornili; Franca Fraternali; Jens Kleinjung
Journal: FASEB J Date: 2011-11-09 Impact factor: 5.191

10. Optimal signal processing in small stochastic biochemical networks.

Authors: Etay Ziv; Ilya Nemenman; Chris H Wiggins
Journal: PLoS One Date: 2007-10-24 Impact factor: 3.240

29 in total

Review 1. Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks.

Authors: L Naomi Handly; Jason Yao; Roy Wollman
Journal: J Mol Biol Date: 2016-07-16 Impact factor: 5.469

Review 2. Adaptive molecular networks controlling chemotactic migration: dynamic inputs and selection of the network architecture.

Authors: Hao Chang; Andre Levchenko
Journal: Philos Trans R Soc Lond B Biol Sci Date: 2013-09-23 Impact factor: 6.237

Systems biology. How information theory handles cell signaling and uncertainty.

Review 1. Information theory and neural coding.

2. Intrinsic noise in gene regulatory networks.

Review 3. Network biology: understanding the cell's functional organization.

4. Enhancement of cellular memory by reducing stochastic transitions.

5. Information flow and optimization in transcriptional regulation.

Review 6. Stochasticity and cell fate.

Review 7. Information theory based approaches to cellular signaling.

8. Multiplexing biochemical signals.

9. Detection of allosteric signal transmission by information-theoretic analysis of protein dynamics.

10. Optimal signal processing in small stochastic biochemical networks.

Review 1. Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks.

Review 2. Adaptive molecular networks controlling chemotactic migration: dynamic inputs and selection of the network architecture.

3. Robustness, Accuracy, and Cell State Heterogeneity in Biological Systems.

Review 4. Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review.

5. Systems and Network Pharmacology Approaches to Cancer Stem Cells Research and Therapy.

6. Systems biology. Accurate information transmission through dynamic biochemical signaling networks.

7. Desert ants achieve reliable recruitment across noisy interactions.

8. Information transfer by leaky, heterogeneous, protein kinase signaling systems.

9. Computational modelling of LY303511 and TRAIL-induced apoptosis suggests dynamic regulation of cFLIP.

10. The evolution of cell-to-cell communication in a sporulating bacterium.