Literature DB >> 20453874

Autotrophic carbon fixation in archaea.

Ivan A Berg1, Daniel Kockelkorn, W Hugo Ramos-Vera, Rafael F Say, Jan Zarzycki, Michael Hügler, Birgit E Alber, Georg Fuchs.   

Abstract

The acquisition of cellular carbon from inorganic carbon is a prerequisite for life and marked the transition from the inorganic to the organic world. Recent theories of the origins of life assume that chemo-evolution took place in a hot volcanic flow setting through a transition metal-catalysed, autocatalytic carbon fixation cycle. Many archaea live in volcanic habitats under such constraints, in high temperatures with only inorganic substances and often under anoxic conditions. In this Review, we describe the diverse carbon fixation mechanisms that are found in archaea. These reactions differ fundamentally from those of the well-known Calvin cycle, and their distribution mirrors the phylogenetic positions of the archaeal lineages and the needs of the ecological niches that they occupy.

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Year:  2010        PMID: 20453874     DOI: 10.1038/nrmicro2365

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  97 in total

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Review 2.  The autotrophic pathway of acetate synthesis in acetogenic bacteria.

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Authors:  Birgit E Alber; Georg Fuchs
Journal:  J Biol Chem       Date:  2002-01-30       Impact factor: 5.157

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Journal:  J Bacteriol       Date:  2007-03-30       Impact factor: 3.490

5.  Genome dynamics in a natural archaeal population.

Authors:  Eric E Allen; Gene W Tyson; Rachel J Whitaker; John C Detter; Paul M Richardson; Jillian F Banfield
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-31       Impact factor: 11.205

6.  Ribose-5-phosphate biosynthesis in Methanocaldococcus jannaschii occurs in the absence of a pentose-phosphate pathway.

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Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

7.  Enzymes of a novel autotrophic CO2 fixation pathway in the phototrophic bacterium Chloroflexus aurantiacus, the 3-hydroxypropionate cycle.

Authors:  G Strauss; G Fuchs
Journal:  Eur J Biochem       Date:  1993-08-01

8.  Differences in carbon isotope discrimination of three variants of D-ribulose-1,5-bisphosphate carboxylase/oxygenase reflect differences in their catalytic mechanisms.

Authors:  Dennis B McNevin; Murray R Badger; Spencer M Whitney; Susanne von Caemmerer; Guillaume G B Tcherkez; Graham D Farquhar
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9.  Study of the distribution of autotrophic CO2 fixation cycles in Crenarchaeota.

Authors:  Ivan A Berg; W Hugo Ramos-Vera; Anna Petri; Harald Huber; Georg Fuchs
Journal:  Microbiology       Date:  2009-10-22       Impact factor: 2.777

10.  Molecular dissection of bacterial acrylate catabolism--unexpected links with dimethylsulfoniopropionate catabolism and dimethyl sulfide production.

Authors:  Jonathan D Todd; Andrew R J Curson; Nefeli Nikolaidou-Katsaraidou; Charles A Brearley; Nicholas J Watmough; Yohan Chan; Philip C B Page; Lei Sun; Andrew W B Johnston
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  180 in total

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2.  Genome sequence of "Candidatus Nitrosoarchaeum limnia" BG20, a low-salinity ammonia-oxidizing archaeon from the San Francisco Bay estuary.

Authors:  Annika C Mosier; Eric E Allen; Maria Kim; Steven Ferriera; Christopher A Francis
Journal:  J Bacteriol       Date:  2012-04       Impact factor: 3.490

Review 3.  The dynamic roles of intracellular lipid droplets: from archaea to mammals.

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Journal:  Protoplasma       Date:  2011-10-15       Impact factor: 3.356

Review 4.  Biochemistry and evolution of anaerobic energy metabolism in eukaryotes.

Authors:  Miklós Müller; Marek Mentel; Jaap J van Hellemond; Katrin Henze; Christian Woehle; Sven B Gould; Re-Young Yu; Mark van der Giezen; Aloysius G M Tielens; William F Martin
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

Review 5.  Increasing photosynthetic carbon assimilation in C3 plants to improve crop yield: current and future strategies.

Authors:  Christine A Raines
Journal:  Plant Physiol       Date:  2010-11-11       Impact factor: 8.340

Review 6.  Archaea--timeline of the third domain.

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Journal:  Nat Rev Microbiol       Date:  2010-12-06       Impact factor: 60.633

Review 7.  Improving carbon fixation pathways.

Authors:  Daniel C Ducat; Pamela A Silver
Journal:  Curr Opin Chem Biol       Date:  2012-05-29       Impact factor: 8.822

8.  Essentiality of the glnA gene in Haloferax mediterranei: gene conversion and transcriptional analysis.

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Journal:  Extremophiles       Date:  2020-04-16       Impact factor: 2.395

9.  Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans.

Authors:  Donato Giovannelli; Stefan M Sievert; Michael Hügler; Stephanie Markert; Dörte Becher; Thomas Schweder; Costantino Vetriani
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10.  Nontemplate-driven polymers: clues to a minimal form of organization closure at the early stages of living systems.

Authors:  Miguel Ángel Freire
Journal:  Theory Biosci       Date:  2015-04-28       Impact factor: 1.919

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