Literature DB >> 17925403

Differences in carbon isotope discrimination of three variants of D-ribulose-1,5-bisphosphate carboxylase/oxygenase reflect differences in their catalytic mechanisms.

Dennis B McNevin1, Murray R Badger, Spencer M Whitney, Susanne von Caemmerer, Guillaume G B Tcherkez, Graham D Farquhar.   

Abstract

The carboxylation kinetic (stable carbon) isotope effect was measured for purified d-ribulose-1,5-bisphosphate carboxylases/oxygenases (Rubiscos) with aqueous CO(2) as substrate by monitoring Rayleigh fractionation using membrane inlet mass spectrometry. This resulted in discriminations (Delta) of 27.4 +/- 0.9 per thousand for wild-type tobacco Rubisco, 22.2 +/- 2.1 per thousand for Rhodospirillum rubrum Rubisco, and 11.2 +/- 1.6 per thousand for a large subunit mutant of tobacco Rubisco in which Leu(335) is mutated to valine (L335V). These Delta values are consistent with the photosynthetic discrimination determined for wild-type tobacco and transplastomic tobacco lines that exclusively produce R. rubrum or L335V Rubisco. The Delta values are indicative of the potential evolutionary variability of Delta values for a range of Rubiscos from different species: Form I Rubisco from higher plants; prokaryotic Rubiscos, including Form II; and the L335V mutant. We explore the implications of these Delta values for the Rubisco catalytic mechanism and suggest that Rubiscos that are associated with a lower Delta value have a less product-like carboxylation transition state and/or allow a decarboxylation step that evolution has excluded in higher plants.

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Year:  2007        PMID: 17925403     DOI: 10.1074/jbc.M706274200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

Review 1.  Autotrophic carbon fixation in archaea.

Authors:  Ivan A Berg; Daniel Kockelkorn; W Hugo Ramos-Vera; Rafael F Say; Jan Zarzycki; Michael Hügler; Birgit E Alber; Georg Fuchs
Journal:  Nat Rev Microbiol       Date:  2010-05-10       Impact factor: 60.633

2.  On-line stable isotope gas exchange reveals an inducible but leaky carbon concentrating mechanism in Nannochloropsis salina.

Authors:  David T Hanson; Aaron M Collins; Howland D T Jones; John Roesgen; Samuel Lopez-Nieves; Jerilyn A Timlin
Journal:  Photosynth Res       Date:  2014-05-21       Impact factor: 3.573

Review 3.  Why small fluxes matter: the case and approaches for improving measurements of photosynthesis and (photo)respiration.

Authors:  David T Hanson; Samantha S Stutz; John S Boyer
Journal:  J Exp Bot       Date:  2016-04-19       Impact factor: 6.992

4.  Directional change in leaf dry matter δ 13C during leaf development is widespread in C3 plants.

Authors:  Nara O Vogado; Klaus Winter; Nerea Ubierna; Graham D Farquhar; Lucas A Cernusak
Journal:  Ann Bot       Date:  2020-10-30       Impact factor: 4.357

Review 5.  Evolution of an intermediate C4 photosynthesis in the non-foliar tissues of the Poaceae.

Authors:  Parimalan Rangan; Dhammaprakash P Wankhede; Rajkumar Subramani; Viswanathan Chinnusamy; Surendra K Malik; Mirza Jaynul Baig; Kuldeep Singh; Robert Henry
Journal:  Photosynth Res       Date:  2022-06-01       Impact factor: 3.429

6.  Influence of diurnal variation in mesophyll conductance on modelled 13C discrimination: results from a field study.

Authors:  Christopher P Bickford; David T Hanson; Nate G McDowell
Journal:  J Exp Bot       Date:  2010-05-25       Impact factor: 6.992

Review 7.  On-line mass spectrometry: membrane inlet sampling.

Authors:  Katrin Beckmann; Johannes Messinger; Murray Ronald Badger; Tom Wydrzynski; Warwick Hillier
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

8.  Exploiting transplastomically modified Rubisco to rapidly measure natural diversity in its carbon isotope discrimination using tuneable diode laser spectroscopy.

Authors:  Susanne von Caemmerer; Youshi Tazoe; John R Evans; Spencer M Whitney
Journal:  J Exp Bot       Date:  2014-03-31       Impact factor: 6.992

9.  Whole Genome Comparison of Thermus sp. NMX2.A1 Reveals Principle Carbon Metabolism Differences with Closest Relation Thermus scotoductus SA-01.

Authors:  Walter J Müller; Nokuthula Tlalajoe; Errol D Cason; Derek Litthauer; Oleg Reva; Elzbieta Brzuszkiewicz; Esta van Heerden
Journal:  G3 (Bethesda)       Date:  2016-09-08       Impact factor: 3.154

10.  Constraining the timing of the Great Oxidation Event within the Rubisco phylogenetic tree.

Authors:  B Kacar; V Hanson-Smith; Z R Adam; N Boekelheide
Journal:  Geobiology       Date:  2017-07-03       Impact factor: 4.407

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