Literature DB >> 21132019

Archaea--timeline of the third domain.

Ricardo Cavicchioli1.   

Abstract

The Archaea evolved as one of the three primary lineages several billion years ago, but the first archaea to be discovered were described in the scientific literature about 130 years ago. Moreover, the Archaea were formally proposed as the third domain of life only 20 years ago. Over this very short period of investigative history, the scientific community has learned many remarkable things about the Archaea--their unique cellular components and pathways, their abundance and critical function in diverse natural environments, and their quintessential role in shaping the evolutionary path of life on Earth. This Review charts the 'archaea movement', from its genesis through to key findings that, when viewed together, illustrate just how strongly the field has built on new knowledge to advance our understanding not only of the Archaea, but of biology as a whole.

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Year:  2010        PMID: 21132019     DOI: 10.1038/nrmicro2482

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  145 in total

Review 1.  Life in extreme environments.

Authors:  L J Rothschild; R L Mancinelli
Journal:  Nature       Date:  2001-02-22       Impact factor: 49.962

Review 2.  Low-temperature extremophiles and their applications.

Authors:  Ricardo Cavicchioli; Khawar S Siddiqui; David Andrews; Kevin R Sowers
Journal:  Curr Opin Biotechnol       Date:  2002-06       Impact factor: 9.740

3.  Extremophiles and the search for extraterrestrial life.

Authors:  Ricardo Cavicchioli
Journal:  Astrobiology       Date:  2002       Impact factor: 4.335

4.  Archaea in coastal marine environments.

Authors:  E F DeLong
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

5.  RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2006-08-23       Impact factor: 6.937

6.  The phylogeny of prokaryotes.

Authors:  G E Fox; E Stackebrandt; R B Hespell; J Gibson; J Maniloff; T A Dyer; R S Wolfe; W E Balch; R S Tanner; L J Magrum; L B Zablen; R Blakemore; R Gupta; L Bonen; B J Lewis; D A Stahl; K R Luehrsen; K N Chen; C R Woese
Journal:  Science       Date:  1980-07-25       Impact factor: 47.728

7.  Haloquadratum walsbyi gen. nov., sp. nov., the square haloarchaeon of Walsby, isolated from saltern crystallizers in Australia and Spain.

Authors:  David G Burns; Peter H Janssen; Takashi Itoh; Masahiro Kamekura; Zhuo Li; Grant Jensen; Francisco Rodríguez-Valera; Henk Bolhuis; Mike L Dyall-Smith
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

8.  Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia.

Authors:  Anne E Dekas; Rachel S Poretsky; Victoria J Orphan
Journal:  Science       Date:  2009-10-16       Impact factor: 47.728

9.  Genomic analysis reveals chromosomal variation in natural populations of the uncultured psychrophilic archaeon Cenarchaeum symbiosum.

Authors:  C Schleper; E F DeLong; C M Preston; R A Feldman; K Y Wu; R V Swanson
Journal:  J Bacteriol       Date:  1998-10       Impact factor: 3.490

10.  Nanoarchaeal 16S rRNA gene sequences are widely dispersed in hyperthermophilic and mesophilic halophilic environments.

Authors:  Ana Casanueva; Ncebakazi Galada; Gillian C Baker; William D Grant; Shaun Heaphy; Brian Jones; Ma Yanhe; Antonio Ventosa; Jenny Blamey; Don A Cowan
Journal:  Extremophiles       Date:  2008-06-14       Impact factor: 2.395

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  48 in total

1.  Archaeal Distribution in Moonmilk Deposits from Alpine Caves and Their Ecophysiological Potential.

Authors:  Christoph Reitschuler; Christoph Spötl; Katrin Hofmann; Andreas O Wagner; Paul Illmer
Journal:  Microb Ecol       Date:  2016-01-20       Impact factor: 4.552

2.  High level of intergenera gene exchange shapes the evolution of haloarchaea in an isolated Antarctic lake.

Authors:  Matthew Z DeMaere; Timothy J Williams; Michelle A Allen; Mark V Brown; John A E Gibson; John Rich; Federico M Lauro; Michael Dyall-Smith; Karen W Davenport; Tanja Woyke; Nikos C Kyrpides; Susannah G Tringe; Ricardo Cavicchioli
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

Review 3.  The archaeal cell envelope.

Authors:  Sonja-Verena Albers; Benjamin H Meyer
Journal:  Nat Rev Microbiol       Date:  2011-06       Impact factor: 60.633

4.  The Tubular Sheaths Encasing Methanosaeta thermophila Filaments Are Functional Amyloids.

Authors:  Morten S Dueholm; Poul Larsen; Kai Finster; Marcel R Stenvang; Gunna Christiansen; Brian S Vad; Andreas Bøggild; Daniel E Otzen; Per Halkjær Nielsen
Journal:  J Biol Chem       Date:  2015-06-24       Impact factor: 5.157

Review 5.  Interactions between diatoms and bacteria.

Authors:  Shady A Amin; Micaela S Parker; E Virginia Armbrust
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

6.  Vertical distribution of archaeal communities associated with anaerobic degradation of pentabromodiphenyl ether (BDE-99) in river-based groundwater recharge with reclaimed water.

Authors:  Yulin Yan; Mengsi Ma; Xiang Liu; Weifang Ma; Yangyao Li
Journal:  Environ Sci Pollut Res Int       Date:  2017-09-04       Impact factor: 4.223

7.  Molecular analysis of the human faecal archaea in a southern Indian population.

Authors:  Sandya B Rani; Ramadass Balamurugan; Balakrishnan S Ramakrishna
Journal:  J Biosci       Date:  2017-03       Impact factor: 1.826

Review 8.  Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease.

Authors:  Zhe Lyu; William B Whitman
Journal:  Cell Mol Life Sci       Date:  2016-06-03       Impact factor: 9.261

9.  Genetic manipulation of Methanosarcina spp.

Authors:  Petra R A Kohler; William W Metcalf
Journal:  Front Microbiol       Date:  2012-07-24       Impact factor: 5.640

10.  Proteomic properties reveal phyloecological clusters of Archaea.

Authors:  Nela Nikolic; Zlatko Smole; Anita Krisko
Journal:  PLoS One       Date:  2012-10-25       Impact factor: 3.240

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