Literature DB >> 20426075

A Riemannian framework for orientation distribution function computing.

Jian Cheng1, Aurobrata Ghosh, Tianzi Jiang, Rachid Deriche.   

Abstract

Compared with Diffusion Tensor Imaging (DTI), High Angular Resolution Imaging (HARDI) can better explore the complex microstructure of white matter. Orientation Distribution Function (ODF) is used to describe the probability of the fiber direction. Fisher information metric has been constructed for probability density family in Information Geometry theory and it has been successfully applied for tensor computing in DTI. In this paper, we present a state of the art Riemannian framework for ODF computing based on Information Geometry and sparse representation of orthonormal bases. In this Riemannian framework, the exponential map, logarithmic map and geodesic have closed forms. And the weighted Frechet mean exists uniquely on this manifold. We also propose a novel scalar measurement, named Geometric Anisotropy (GA), which is the Riemannian geodesic distance between the ODF and the isotropic ODF. The Renyi entropy H1/2 of the ODF can be computed from the GA. Moreover, we present an Affine-Euclidean framework and a Log-Euclidean framework so that we can work in an Euclidean space. As an application, Lagrange interpolation on ODF field is proposed based on weighted Frechet mean. We validate our methods on synthetic and real data experiments. Compared with existing Riemannian frameworks on ODF, our framework is model-free. The estimation of the parameters, i.e. Riemannian coordinates, is robust and linear. Moreover it should be noted that our theoretical results can be used for any probability density function (PDF) under an orthonormal basis representation.

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Year:  2009        PMID: 20426075     DOI: 10.1007/978-3-642-04268-3_112

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  13 in total

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3.  Multivariate General Linear Models (MGLM) on Riemannian Manifolds with Applications to Statistical Analysis of Diffusion Weighted Images.

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Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2014-06-23

4.  ROTATIONAL GRADIENT FIELD FOR INTERPOLATION OF FIBER ORIENTATION DISTRIBUTION IN CONNECTIVITY ANALYSIS.

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5.  Tracking on the Product Manifold of Shape and Orientation for Tractography from Diffusion MRI.

Authors:  Yuanxiang Wang; Hesamoddin Salehian; Guang Cheng; Baba C Vemuri
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2014-06

6.  A nonparametric Riemannian framework for processing high angular resolution diffusion images and its applications to ODF-based morphometry.

Authors:  Alvina Goh; Christophe Lenglet; Paul M Thompson; René Vidal
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7.  GROUP ACTION INDUCED AVERAGING FOR HARDI PROCESSING.

Authors:  H Ertan Cetingül; Bijan Afsari; Margaret J Wright; Paul M Thompson; Rene Vidal
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2012

8.  Segmentation of high angular resolution diffusion MRI using sparse riemannian manifold clustering.

Authors:  H Ertan Çetingül; Margaret J Wright; Paul M Thompson; René Vidal
Journal:  IEEE Trans Med Imaging       Date:  2013-10-03       Impact factor: 10.048

9.  Non-Negative Spherical Deconvolution (NNSD) for estimation of fiber Orientation Distribution Function in single-/multi-shell diffusion MRI.

Authors:  Jian Cheng; Rachid Deriche; Tianzi Jiang; Dinggang Shen; Pew-Thian Yap
Journal:  Neuroimage       Date:  2014-08-07       Impact factor: 6.556

10.  Tractography from HARDI using an intrinsic unscented Kalman filter.

Authors:  Guang Cheng; Hesamoddin Salehian; John R Forder; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2014-09-05       Impact factor: 10.048

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