Literature DB >> 20421421

Myogenic microRNA expression requires ATP-dependent chromatin remodeling enzyme function.

Chandrashekara Mallappa1, Brian T Nasipak, Letitiah Etheridge, Elliot J Androphy, Stephen N Jones, Charles G Sagerström, Yasuyuki Ohkawa, Anthony N Imbalzano.   

Abstract

Knockdown of the Brg1 ATPase subunit of SWI/SNF chromatin remodeling enzymes in developing zebrafish caused stunted tail formation and altered sarcomeric actin organization, which phenocopies the loss of the microRNA processing enzyme Dicer, or the knockdown of myogenic microRNAs. Furthermore, myogenic microRNA expression and differentiation was blocked in Brg1 conditional myoblasts differentiated ex vivo. The binding of Brg1 upstream of myogenic microRNA sequences correlated with MyoD binding and accessible chromatin structure in satellite cells and myofibers, and it was required for chromatin accessibility and microRNA expression in a tissue culture model for myogenesis. The results implicate ATP-dependent chromatin remodelers in myogenic microRNA gene regulation.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20421421      PMCID: PMC2897572          DOI: 10.1128/MCB.00214-10

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  47 in total

1.  Positional cloning of the young mutation identifies an essential role for the Brahma chromatin remodeling complex in mediating retinal cell differentiation.

Authors:  Ronald G Gregg; Gregory B Willer; James M Fadool; John E Dowling; Brian A Link
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-14       Impact factor: 11.205

Review 2.  MicroRNAs: genomics, biogenesis, mechanism, and function.

Authors:  David P Bartel
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

3.  Pbx marks genes for activation by MyoD indicating a role for a homeodomain protein in establishing myogenic potential.

Authors:  Charlotte A Berkes; Donald A Bergstrom; Bennett H Penn; Karen J Seaver; Paul S Knoepfler; Stephen J Tapscott
Journal:  Mol Cell       Date:  2004-05-21       Impact factor: 17.970

4.  MicroRNAs regulate brain morphogenesis in zebrafish.

Authors:  Antonio J Giraldez; Ryan M Cinalli; Margaret E Glasner; Anton J Enright; J Michael Thomson; Scott Baskerville; Scott M Hammond; David P Bartel; Alexander F Schier
Journal:  Science       Date:  2005-03-17       Impact factor: 47.728

5.  Polybromo protein BAF180 functions in mammalian cardiac chamber maturation.

Authors:  Zhong Wang; Weiguo Zhai; James A Richardson; Eric N Olson; Juanito J Meneses; Meri T Firpo; Chulho Kang; William C Skarnes; Robert Tjian
Journal:  Genes Dev       Date:  2004-12-15       Impact factor: 11.361

6.  Myogenin's functions do not overlap with those of MyoD or Myf-5 during mouse embryogenesis.

Authors:  A Rawls; J H Morris; M Rudnicki; T Braun; H H Arnold; W H Klein; E N Olson
Journal:  Dev Biol       Date:  1995-11       Impact factor: 3.582

7.  Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization.

Authors:  Yuichiro Mishima; Cei Abreu-Goodger; Alison A Staton; Carlos Stahlhut; Chong Shou; Chao Cheng; Mark Gerstein; Anton J Enright; Antonio J Giraldez
Journal:  Genes Dev       Date:  2009-02-24       Impact factor: 11.361

8.  The microRNA-producing enzyme Dicer1 is essential for zebrafish development.

Authors:  Erno Wienholds; Marco J Koudijs; Freek J M van Eeden; Edwin Cuppen; Ronald H A Plasterk
Journal:  Nat Genet       Date:  2003-10-05       Impact factor: 38.330

9.  Dicer is essential for mouse development.

Authors:  Emily Bernstein; Sang Yong Kim; Michelle A Carmell; Elizabeth P Murchison; Heather Alcorn; Mamie Z Li; Alea A Mills; Stephen J Elledge; Kathryn V Anderson; Gregory J Hannon
Journal:  Nat Genet       Date:  2003-10-05       Impact factor: 38.330

10.  p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci.

Authors:  Cristiano Simone; Sonia Vanina Forcales; David A Hill; Anthony N Imbalzano; Lucia Latella; Pier Lorenzo Puri
Journal:  Nat Genet       Date:  2004-06-20       Impact factor: 38.330

View more
  20 in total

1.  An improved restriction enzyme accessibility assay for analyzing changes in chromatin structure in samples of limited cell number.

Authors:  Yasuyuki Ohkawa; Chandrashekara Mallappa; Caroline S Dacwag Vallaster; Anthony N Imbalzano
Journal:  Methods Mol Biol       Date:  2012

2.  Dynamic BRG1 recruitment during T helper differentiation and activation reveals distal regulatory elements.

Authors:  Supriyo De; Andrea L Wurster; Patricia Precht; William H Wood; Kevin G Becker; Michael J Pazin
Journal:  Mol Cell Biol       Date:  2011-01-24       Impact factor: 4.272

Review 3.  BAF60 A, B, and Cs of muscle determination and renewal.

Authors:  Pier Lorenzo Puri; Mark Mercola
Journal:  Genes Dev       Date:  2012-12-07       Impact factor: 11.361

Review 4.  ATP-dependent chromatin remodeling during mammalian development.

Authors:  Swetansu K Hota; Benoit G Bruneau
Journal:  Development       Date:  2016-08-15       Impact factor: 6.868

5.  SMARCD2 subunit of SWI/SNF chromatin-remodeling complexes mediates granulopoiesis through a CEBPɛ dependent mechanism.

Authors:  Pierre Priam; Veneta Krasteva; Philippe Rousseau; Giovanni D'Angelo; Louis Gaboury; Guy Sauvageau; Julie A Lessard
Journal:  Nat Genet       Date:  2017-04-03       Impact factor: 38.330

Review 6.  Sculpting chromatin beyond the double helix: epigenetic control of skeletal myogenesis.

Authors:  Vittorio Sartorelli; Aster H Juan
Journal:  Curr Top Dev Biol       Date:  2011       Impact factor: 4.897

Review 7.  Epigenetic control of skeletal muscle regeneration: Integrating genetic determinants and environmental changes.

Authors:  Lorenzo Giordani; Pier Lorenzo Puri
Journal:  FEBS J       Date:  2013-07-15       Impact factor: 5.542

Review 8.  SWI/SNF complexes, chromatin remodeling and skeletal myogenesis: it's time to exchange!

Authors:  Sonia Albini; Pier Lorenzo Puri
Journal:  Exp Cell Res       Date:  2010-05-27       Impact factor: 3.905

9.  Regulation of microRNAs by Brahma-related gene 1 (Brg1) in smooth muscle cells.

Authors:  Meng Chen; B Paul Herring
Journal:  J Biol Chem       Date:  2013-01-20       Impact factor: 5.157

Review 10.  SWI/SNF-directed stem cell lineage specification: dynamic composition regulates specific stages of skeletal myogenesis.

Authors:  Paula Coutinho Toto; Pier Lorenzo Puri; Sonia Albini
Journal:  Cell Mol Life Sci       Date:  2016-05-20       Impact factor: 9.261

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.