Literature DB >> 20398772

Reproducibility of thalamic segmentation based on probabilistic tractography.

Catherine Traynor1, Rolf A Heckemann, Alexander Hammers, Jonathan O'Muircheartaigh, William R Crum, Gareth J Barker, Mark P Richardson.   

Abstract

Reliable identification of thalamic nuclei is required to improve targeting of electrodes used in Deep Brain Stimulation (DBS), and for exploring the role of thalamus in health and disease. A previously described method using probabilistic tractography to segment the thalamus based on connections to cortical target regions was implemented. Both within- and between-subject reproducibility were quantitatively assessed by the overlap of the resulting segmentations; the effect of two different numbers of target regions (6 and 31) on reproducibility of the segmentation results was also investigated. Very high reproducibility was observed when a single dataset was processed multiple times using different starting conditions. Thalamic segmentation was also very reproducible when multiple datasets from the same subject were processed using six cortical target regions. Within-subject reproducibility was reduced when the number of target regions was increased, particularly in medial and posterior regions of the thalamus. A large degree of overlap in segmentation results from different subjects was obtained, particularly in thalamic regions classified as connecting to frontal, parietal, temporal and pre-central cortical target regions. Copyright 2010 Elsevier Inc. All rights reserved.

Mesh:

Year:  2010        PMID: 20398772     DOI: 10.1016/j.neuroimage.2010.04.024

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  33 in total

1.  Investigation of anatomical thalamo-cortical connectivity and FMRI activation in schizophrenia.

Authors:  Stefano Marenco; Jason L Stein; Antonina A Savostyanova; Fabio Sambataro; Hao-Yang Tan; Aaron L Goldman; Beth A Verchinski; Alan S Barnett; Dwight Dickinson; José A Apud; Joseph H Callicott; Andreas Meyer-Lindenberg; Daniel R Weinberger
Journal:  Neuropsychopharmacology       Date:  2011-09-28       Impact factor: 7.853

2.  Generation of individualized thalamus target maps by using statistical shape models and thalamocortical tractography.

Authors:  A Jakab; R Blanc; E L Berényi; G Székely
Journal:  AJNR Am J Neuroradiol       Date:  2012-06-14       Impact factor: 3.825

3.  Connectivity-based parcellation of the thalamus in multiple sclerosis and its implications for cognitive impairment: A multicenter study.

Authors:  Alvino Bisecco; Maria A Rocca; Elisabetta Pagani; Laura Mancini; Christian Enzinger; Antonio Gallo; Hugo Vrenken; Maria Laura Stromillo; Massimiliano Copetti; David L Thomas; Franz Fazekas; Gioacchino Tedeschi; Frederik Barkhof; Nicola De Stefano; Massimo Filippi
Journal:  Hum Brain Mapp       Date:  2015-04-14       Impact factor: 5.038

4.  A method for pre-operative single-subject thalamic segmentation based on probabilistic tractography for essential tremor deep brain stimulation.

Authors:  Erik H Middlebrooks; Vanessa M Holanda; Ibrahim S Tuna; Hrishikesh D Deshpande; Markus Bredel; Leonardo Almeida; Harrison C Walker; Barton L Guthrie; Kelly D Foote; Michael S Okun
Journal:  Neuroradiology       Date:  2018-01-06       Impact factor: 2.804

5.  MAPBOT: Meta-analytic parcellation based on text, and its application to the human thalamus.

Authors:  Rui Yuan; Paul A Taylor; Tara L Alvarez; Durga Misra; Bharat B Biswal
Journal:  Neuroimage       Date:  2017-06-17       Impact factor: 6.556

6.  Functional connectivity-based identification of subdivisions of the basal ganglia and thalamus using multilevel independent component analysis of resting state fMRI.

Authors:  Dae-Jin Kim; Bumhee Park; Hae-Jeong Park
Journal:  Hum Brain Mapp       Date:  2012-02-14       Impact factor: 5.038

Review 7.  Multi-atlas segmentation of biomedical images: A survey.

Authors:  Juan Eugenio Iglesias; Mert R Sabuncu
Journal:  Med Image Anal       Date:  2015-07-06       Impact factor: 8.545

8.  Segmentation of the thalamus based on BOLD frequencies affected in temporal lobe epilepsy.

Authors:  Victoria L Morgan; Baxter P Rogers; Bassel Abou-Khalil
Journal:  Epilepsia       Date:  2015-09-11       Impact factor: 5.864

9.  Label-fusion-segmentation and deformation-based shape analysis of deep gray matter in multiple sclerosis: the impact of thalamic subnuclei on disability.

Authors:  Stefano Magon; M Mallar Chakravarty; Michael Amann; Katrin Weier; Yvonne Naegelin; Michaela Andelova; Ernst-Wilhelm Radue; Christoph Stippich; Jason P Lerch; Ludwig Kappos; Till Sprenger
Journal:  Hum Brain Mapp       Date:  2014-02-07       Impact factor: 5.038

Review 10.  Diffusion MRI at 25: exploring brain tissue structure and function.

Authors:  Denis Le Bihan; Heidi Johansen-Berg
Journal:  Neuroimage       Date:  2011-11-20       Impact factor: 6.556

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