Literature DB >> 22700756

Generation of individualized thalamus target maps by using statistical shape models and thalamocortical tractography.

A Jakab1, R Blanc, E L Berényi, G Székely.   

Abstract

BACKGROUND AND
PURPOSE: Neurosurgical interventions of the thalamus rely on transferring stereotactic coordinates from an atlas onto the patient's MR brain images. We propose a prototype application for performing thalamus target map individualization by fusing patient-specific thalamus geometric information and diffusion tensor tractography.
MATERIALS AND METHODS: Previously, our workgroup developed a thalamus atlas by fusing anatomic information from 7 histologically processed thalami. Thalamocortical connectivity maps were generated from DTI scans of 40 subjects by using a previously described procedure and were mapped to a standard neuroimaging space. These data were merged into a statistical shape model describing the morphologic variability of the thalamic outline, nuclei, and connectivity landmarks. This model was used to deform the atlas to individual images. Postmortem MR imaging scans were used to quantify the accuracy of nuclei predictions.
RESULTS: Reliable tractography-based markers were located in the ventral lateral thalamus, with the somatosensory connections coinciding with the VPLa and VPLp nuclei; and motor/premotor connections, with the VLpv and VLa nuclei. Prediction accuracy of thalamus outlines was higher with the SSM approach than the ACPC alignment of data (0.56 mm versus 1.24; Dice overlap: 0.87 versus 0.7); for individual nuclei: 0.65 mm, Dice: 0.63 (SSM); 1.24 mm, Dice: 0.4 (ACPC).
CONCLUSIONS: Previous studies have already applied DTI to the thalamus. As a further step in this direction, we demonstrate a hybrid approach by using statistical shape models, which have the potential to cope with intersubject variations in individual thalamus geometry.

Entities:  

Mesh:

Year:  2012        PMID: 22700756      PMCID: PMC7965575          DOI: 10.3174/ajnr.A3140

Source DB:  PubMed          Journal:  AJNR Am J Neuroradiol        ISSN: 0195-6108            Impact factor:   3.825


  31 in total

1.  Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging.

Authors:  T E J Behrens; H Johansen-Berg; M W Woolrich; S M Smith; C A M Wheeler-Kingshott; P A Boulby; G J Barker; E L Sillery; K Sheehan; O Ciccarelli; A J Thompson; J M Brady; P M Matthews
Journal:  Nat Neurosci       Date:  2003-07       Impact factor: 24.884

Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Towards construction of an ideal stereotactic brain atlas.

Authors:  Wieslaw L Nowinski
Journal:  Acta Neurochir (Wien)       Date:  2007-11-21       Impact factor: 2.216

4.  Noninvasive functional and structural connectivity mapping of the human thalamocortical system.

Authors:  Dongyang Zhang; Abraham Z Snyder; Joshua S Shimony; Michael D Fox; Marcus E Raichle
Journal:  Cereb Cortex       Date:  2009-09-03       Impact factor: 5.357

5.  Segmentation of the thalamus in MRI based on T1 and T2.

Authors:  Catherine R Traynor; Gareth J Barker; William R Crum; Steve C R Williams; Mark P Richardson
Journal:  Neuroimage       Date:  2011-02-17       Impact factor: 6.556

6.  Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI.

Authors:  P J Basser; C Pierpaoli
Journal:  J Magn Reson B       Date:  1996-06

7.  A mean three-dimensional atlas of the human thalamus: generation from multiple histological data.

Authors:  Axel Krauth; Remi Blanc; Alejandra Poveda; Daniel Jeanmonod; Anne Morel; Gábor Székely
Journal:  Neuroimage       Date:  2009-10-21       Impact factor: 6.556

8.  High-intensity focused ultrasound for noninvasive functional neurosurgery.

Authors:  Ernst Martin; Daniel Jeanmonod; Anne Morel; Eyal Zadicario; Beat Werner
Journal:  Ann Neurol       Date:  2009-12       Impact factor: 10.422

9.  Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?

Authors:  T E J Behrens; H Johansen Berg; S Jbabdi; M F S Rushworth; M W Woolrich
Journal:  Neuroimage       Date:  2006-10-27       Impact factor: 6.556

10.  Reliable identification of the auditory thalamus using multi-modal structural analyses.

Authors:  J T Devlin; E L Sillery; D A Hall; P Hobden; T E J Behrens; R G Nunes; S Clare; P M Matthews; D R Moore; H Johansen-Berg
Journal:  Neuroimage       Date:  2006-02-09       Impact factor: 6.556

View more
  24 in total

1.  Subcortical roles in lexical task processing: Inferences from thalamic and subthalamic event-related potentials.

Authors:  Hannes O Tiedt; Felicitas Ehlen; Lea K Krugel; Andreas Horn; Andrea A Kühn; Fabian Klostermann
Journal:  Hum Brain Mapp       Date:  2016-09-20       Impact factor: 5.038

2.  Automated thalamic nuclei segmentation using multi-planar cascaded convolutional neural networks.

Authors:  Mohammad S Majdi; Mahesh B Keerthivasan; Brian K Rutt; Natalie M Zahr; Jeffrey J Rodriguez; Manojkumar Saranathan
Journal:  Magn Reson Imaging       Date:  2020-08-21       Impact factor: 2.546

3.  Lead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging.

Authors:  Andreas Horn; Ningfei Li; Till A Dembek; Ari Kappel; Chadwick Boulay; Siobhan Ewert; Anna Tietze; Andreas Husch; Thushara Perera; Wolf-Julian Neumann; Marco Reisert; Hang Si; Robert Oostenveld; Christopher Rorden; Fang-Cheng Yeh; Qianqian Fang; Todd M Herrington; Johannes Vorwerk; Andrea A Kühn
Journal:  Neuroimage       Date:  2018-09-01       Impact factor: 6.556

4.  Probabilistic conversion of neurosurgical DBS electrode coordinates into MNI space.

Authors:  Andreas Horn; Andrea A Kühn; Angela Merkl; Ludy Shih; Ron Alterman; Michael Fox
Journal:  Neuroimage       Date:  2017-02-03       Impact factor: 6.556

5.  Detailed mapping of human habenula resting-state functional connectivity.

Authors:  Benjamin A Ely; Emily R Stern; Joo-Won Kim; Vilma Gabbay; Junqian Xu
Journal:  Neuroimage       Date:  2019-06-25       Impact factor: 6.556

6.  Toward an electrophysiological "sweet spot" for deep brain stimulation in the subthalamic nucleus.

Authors:  Andreas Horn; Wolf-Julian Neumann; Katharina Degen; Gerd-Helge Schneider; Andrea A Kühn
Journal:  Hum Brain Mapp       Date:  2017-04-08       Impact factor: 5.038

7.  Resting-state functional connectivity of the human habenula in healthy individuals: Associations with subclinical depression.

Authors:  Benjamin A Ely; Junqian Xu; Wayne K Goodman; Kyle A Lapidus; Vilma Gabbay; Emily R Stern
Journal:  Hum Brain Mapp       Date:  2016-03-16       Impact factor: 5.038

8.  Pediatric postoperative cerebellar cognitive affective syndrome follows outflow pathway lesions.

Authors:  Fatimah M Albazron; Joel Bruss; Robin M Jones; Torunn I Yock; Margaret B Pulsifer; Alexander L Cohen; Peg C Nopoulos; Annah N Abrams; Mariko Sato; Aaron D Boes
Journal:  Neurology       Date:  2019-09-16       Impact factor: 9.910

9.  Intra-operative characterisation of subthalamic oscillations in Parkinson's disease.

Authors:  Xinyi Geng; Xin Xu; Andreas Horn; Ningfei Li; Zhipei Ling; Peter Brown; Shouyan Wang
Journal:  Clin Neurophysiol       Date:  2018-02-27       Impact factor: 3.708

10.  Long term correlation of subthalamic beta band activity with motor impairment in patients with Parkinson's disease.

Authors:  Wolf-Julian Neumann; Franziska Staub-Bartelt; Andreas Horn; Julia Schanda; Gerd-Helge Schneider; Peter Brown; Andrea A Kühn
Journal:  Clin Neurophysiol       Date:  2017-09-20       Impact factor: 3.708

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.