Literature DB >> 20394823

High-throughput expression and purification of membrane proteins.

Filippo Mancia1, James Love.   

Abstract

High-throughput (HT) methodologies have had a tremendous impact on structural biology of soluble proteins. High-resolution structure determination relies on the ability of the macromolecule to form ordered crystals that diffract X-rays. While crystallization remains somewhat empirical, for a given protein, success is proportional to the number of conditions screened and to the number of variants trialed. HT techniques have greatly increased the number of targets that can be trialed and the rate at which these can be produced. In terms of number of structures solved, membrane proteins appear to be lagging many years behind their soluble counterparts. Likewise, HT methodologies for production and characterization of these hydrophobic macromolecules are only now emerging. Presented here is an HT platform designed exclusively for membrane proteins that has processed over 5000 targets.

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Year:  2010        PMID: 20394823      PMCID: PMC2933282          DOI: 10.1016/j.jsb.2010.03.021

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  63 in total

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2.  DNA cloning using in vitro site-specific recombination.

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3.  Evaluation of methods for the prediction of membrane spanning regions.

Authors:  S Möller; M D Croning; R Apweiler
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4.  Comparing function and structure between entire proteomes.

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Review 5.  Lactococcus lactis as host for overproduction of functional membrane proteins.

Authors:  Edmund R S Kunji; Dirk-Jan Slotboom; Bert Poolman
Journal:  Biochim Biophys Acta       Date:  2003-02-17

6.  The P1' specificity of tobacco etch virus protease.

Authors:  Rachel B Kapust; József Tözsér; Terry D Copeland; David S Waugh
Journal:  Biochem Biophys Res Commun       Date:  2002-06-28       Impact factor: 3.575

Review 7.  Static light scattering to characterize membrane proteins in detergent solution.

Authors:  Dirk Jan Slotboom; Ria H Duurkens; Kees Olieman; Guus B Erkens
Journal:  Methods       Date:  2008-07-14       Impact factor: 3.608

Review 8.  Practical aspects of overexpressing bacterial secondary membrane transporters for structural studies.

Authors:  Da-Neng Wang; Markus Safferling; M Joanne Lemieux; Heather Griffith; Yong Chen; Xiao-Dan Li
Journal:  Biochim Biophys Acta       Date:  2003-02-17

9.  Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline.

Authors:  Scott A Lesley; Peter Kuhn; Adam Godzik; Ashley M Deacon; Irimpan Mathews; Andreas Kreusch; Glen Spraggon; Heath E Klock; Daniel McMullan; Tanya Shin; Juli Vincent; Alyssa Robb; Linda S Brinen; Mitchell D Miller; Timothy M McPhillips; Mark A Miller; Daniel Scheibe; Jaume M Canaves; Chittibabu Guda; Lukasz Jaroszewski; Thomas L Selby; Marc-Andre Elsliger; John Wooley; Susan S Taylor; Keith O Hodgson; Ian A Wilson; Peter G Schultz; Raymond C Stevens
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-22       Impact factor: 11.205

10.  EcoCyc: a comprehensive view of Escherichia coli biology.

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Journal:  Nucleic Acids Res       Date:  2008-10-30       Impact factor: 16.971

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  17 in total

1.  Selective electrodiffusion of zinc ions in a Zrt-, Irt-like protein, ZIPB.

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2.  Structures of aminoarabinose transferase ArnT suggest a molecular basis for lipid A glycosylation.

Authors:  Vasileios I Petrou; Carmen M Herrera; Kathryn M Schultz; Oliver B Clarke; Jérémie Vendome; David Tomasek; Surajit Banerjee; Kanagalaghatta R Rajashankar; Meagan Belcher Dufrisne; Brian Kloss; Edda Kloppmann; Burkhard Rost; Candice S Klug; M Stephen Trent; Lawrence Shapiro; Filippo Mancia
Journal:  Science       Date:  2016-02-05       Impact factor: 47.728

3.  Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria.

Authors:  Yong Zi Tan; Lei Zhang; José Rodrigues; Ruixiang Blake Zheng; Sabrina I Giacometti; Ana L Rosário; Brian Kloss; Venkata P Dandey; Hui Wei; Richard Brunton; Ashleigh M Raczkowski; Diogo Athayde; Maria João Catalão; Madalena Pimentel; Oliver B Clarke; Todd L Lowary; Margarida Archer; Michael Niederweis; Clinton S Potter; Bridget Carragher; Filippo Mancia
Journal:  Mol Cell       Date:  2020-05-07       Impact factor: 17.970

Review 4.  High throughput platforms for structural genomics of integral membrane proteins.

Authors:  Filippo Mancia; James Love
Journal:  Curr Opin Struct Biol       Date:  2011-07-30       Impact factor: 6.809

5.  A microfluidic approach for protein structure determination at room temperature via on-chip anomalous diffraction.

Authors:  Sarah L Perry; Sudipto Guha; Ashtamurthy S Pawate; Amrit Bhaskarla; Vinayak Agarwal; Satish K Nair; Paul J A Kenis
Journal:  Lab Chip       Date:  2013-07-05       Impact factor: 6.799

6.  Escherichia coli as host for membrane protein structure determination: a global analysis.

Authors:  Georges Hattab; Dror E Warschawski; Karine Moncoq; Bruno Miroux
Journal:  Sci Rep       Date:  2015-07-10       Impact factor: 4.379

7.  In Vitro Reconstitution Platforms of Mammalian Cell-Free Expressed Membrane Proteins.

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Journal:  Methods Mol Biol       Date:  2022

8.  High-performance liquid chromatography separation and intact mass analysis of detergent-solubilized integral membrane proteins.

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Journal:  Anal Biochem       Date:  2010-11-17       Impact factor: 3.365

9.  The crystal structure of α-Dioxygenase provides insight into diversity in the cyclooxygenase-peroxidase superfamily.

Authors:  Christopher C Goulah; Guangyu Zhu; Mary Koszelak-Rosenblum; Michael G Malkowski
Journal:  Biochemistry       Date:  2013-02-14       Impact factor: 3.162

10.  High-throughput cloning and expression of integral membrane proteins in Escherichia coli.

Authors:  Renato Bruni; Brian Kloss
Journal:  Curr Protoc Protein Sci       Date:  2013-11-05
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