Literature DB >> 18625320

Static light scattering to characterize membrane proteins in detergent solution.

Dirk Jan Slotboom1, Ria H Duurkens, Kees Olieman, Guus B Erkens.   

Abstract

Determination of the oligomeric state or the subunit stoichiometry of integral membrane proteins in detergent solution is notoriously difficult, because the amount of detergent (and lipid) associated with the proteins is usually not known. Only two classical methods (sedimentation equilibrium centrifugation and static light scattering) can measure directly the absolute molecular mass of a protein present in a protein/detergent micelle, without any assumption on the amount of detergent bound, or the shape of the proteins. Here the theoretical background and practical aspects of static light scattering analysis of membrane proteins are reviewed using a number of examples from our lab to highlight potential pitfalls. A brief comparison with sedimentation equilibrium centrifugation is given and a detailed protocol of how we perform light scattering analyses is provided.

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Year:  2008        PMID: 18625320     DOI: 10.1016/j.ymeth.2008.06.012

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  71 in total

1.  The membrane proteins SiaQ and SiaM form an essential stoichiometric complex in the sialic acid tripartite ATP-independent periplasmic (TRAP) transporter SiaPQM (VC1777-1779) from Vibrio cholerae.

Authors:  Christopher Mulligan; Andrew P Leech; David J Kelly; Gavin H Thomas
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

2.  Localization and function of the membrane-bound riboflavin in the Na+-translocating NADH:quinone oxidoreductase (Na+-NQR) from Vibrio cholerae.

Authors:  Marco S Casutt; Tamara Huber; René Brunisholz; Minli Tao; Günter Fritz; Julia Steuber
Journal:  J Biol Chem       Date:  2010-06-17       Impact factor: 5.157

3.  Quaternary structure and functional unit of energy coupling factor (ECF)-type transporters.

Authors:  Josy ter Beek; Ria H Duurkens; Guus B Erkens; Dirk Jan Slotboom
Journal:  J Biol Chem       Date:  2010-12-06       Impact factor: 5.157

4.  Cryo-EM structure of OSCA1.2 from Oryza sativa elucidates the mechanical basis of potential membrane hyperosmolality gating.

Authors:  Koustav Maity; John M Heumann; Aaron P McGrath; Noah J Kopcho; Po-Kai Hsu; Chang-Wook Lee; James H Mapes; Denisse Garza; Srinivasan Krishnan; Garry P Morgan; Kevin J Hendargo; Thomas Klose; Steven D Rees; Arturo Medrano-Soto; Milton H Saier; Miguel Piñeros; Elizabeth A Komives; Julian I Schroeder; Geoffrey Chang; Michael H B Stowell
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-21       Impact factor: 11.205

5.  Structural and mechanistic insights into prokaryotic energy-coupling factor transporters.

Authors:  Dirk J Slotboom
Journal:  Nat Rev Microbiol       Date:  2013-12-23       Impact factor: 60.633

6.  Functional characterization of SbmA, a bacterial inner membrane transporter required for importing the antimicrobial peptide Bac7(1-35).

Authors:  Giulia Runti; Maria del Carmen Lopez Ruiz; Tatiana Stoilova; Rohanah Hussain; Matthew Jennions; Hassanul G Choudhury; Monica Benincasa; Renato Gennaro; Konstantinos Beis; Marco Scocchi
Journal:  J Bacteriol       Date:  2013-09-27       Impact factor: 3.490

7.  Voltage-gated sodium channel (NaV) protein dissection creates a set of functional pore-only proteins.

Authors:  David Shaya; Mohamed Kreir; Rebecca A Robbins; Stephanie Wong; Justus Hammon; Andrea Brüggemann; Daniel L Minor
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-11       Impact factor: 11.205

8.  Structure and mechanism of a pentameric formate channel.

Authors:  Andrew B Waight; James Love; Da-Neng Wang
Journal:  Nat Struct Mol Biol       Date:  2009-12-13       Impact factor: 15.369

9.  Regulation of acetate kinase isozymes and its importance for mixed-acid fermentation in Lactococcus lactis.

Authors:  Pranav Puri; Anisha Goel; Agnieszka Bochynska; Bert Poolman
Journal:  J Bacteriol       Date:  2014-01-24       Impact factor: 3.490

10.  Ligand binding and crystal structures of the substrate-binding domain of the ABC transporter OpuA.

Authors:  Justina C Wolters; Ronnie P-A Berntsson; Nadia Gul; Akira Karasawa; Andy-Mark W H Thunnissen; Dirk-Jan Slotboom; Bert Poolman
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240

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