Literature DB >> 20383017

Preliminary X-ray crystallographic analysis of the breakage-reunion domain of the GyrA subunit of DNA gyrase from Colwellia psychrerythraea strain 34H.

Ha Yun Jung1, Kyung Ha Kim, Ji Hye Hyoung, Mi Ra Han, Hyun Kyoung Kim, Ki Jeung Lee, Yangmee Kim, Hak Jun Kim, Yong Seok Heo.   

Abstract

DNA gyrase is a type II topoisomerase that is essential for chromosome segregation and cell division owing to its ability to modify the topological forms of bacterial DNA. In this study, the N-terminal breakage-reunion domain of the GyrA subunit of DNA gyrase from Colwellia psychrerythraea 34H was overexpressed in Escherichia coli, purified and crystallized. Diffraction data were collected to 2.60 A resolution using a synchrotron-radiation source. The crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 98.98, b = 101.56, c = 141.83 A. The asymmetric unit contained two molecules, with a corresponding V(M) of 3.18 A(3) Da(-1) and a solvent content of 59.9%.

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Year:  2010        PMID: 20383017      PMCID: PMC2852339          DOI: 10.1107/S1744309110005567

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  11 in total

1.  Remarkably low temperature optima for extracellular enzyme activity from Arctic bacteria and sea ice.

Authors:  A L Huston; B B Krieger-Brockett; J W Deming
Journal:  Environ Microbiol       Date:  2000-08       Impact factor: 5.491

2.  Alteration of Escherichia coli topoisomerase IV to novobiocin resistance.

Authors:  Christine D Hardy; Nicholas R Cozzarelli
Journal:  Antimicrob Agents Chemother       Date:  2003-03       Impact factor: 5.191

3.  The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.

Authors:  Barbara A Methé; Karen E Nelson; Jody W Deming; Bahram Momen; Eugene Melamud; Xijun Zhang; John Moult; Ramana Madupu; William C Nelson; Robert J Dodson; Lauren M Brinkac; Sean C Daugherty; Anthony S Durkin; Robert T DeBoy; James F Kolonay; Steven A Sullivan; Liwei Zhou; Tanja M Davidsen; Martin Wu; Adrienne L Huston; Matthew Lewis; Bruce Weaver; Janice F Weidman; Hoda Khouri; Terry R Utterback; Tamara V Feldblyum; Claire M Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-25       Impact factor: 11.205

4.  Purification, crystallization and preliminary X-ray diffraction experiments on the breakage-reunion domain of the DNA gyrase from Mycobacterium tuberculosis.

Authors:  Jérémie Piton; Stéphanie Matrat; Stéphanie Petrella; Vincent Jarlier; Alexandra Aubry; Claudine Mayer
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-10-30

5.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Crystal structure of the DNA gyrase GyrA N-terminal domain from Mycobacterium tuberculosis.

Authors:  Elsa M Tretter; Allyn J Schoeffler; Shellie R Weisfield; James M Berger
Journal:  Proteins       Date:  2010-02-01

Review 8.  DNA gyrase: structure and function.

Authors:  R J Reece; A Maxwell
Journal:  Crit Rev Biochem Mol Biol       Date:  1991       Impact factor: 8.250

9.  Topoisomerase IV catalysis and the mechanism of quinolone action.

Authors:  V E Anderson; T D Gootz; N Osheroff
Journal:  J Biol Chem       Date:  1998-07-10       Impact factor: 5.157

Review 10.  The ATP-binding site of type II topoisomerases as a target for antibacterial drugs.

Authors:  Anthony Maxwell; David M Lawson
Journal:  Curr Top Med Chem       Date:  2003       Impact factor: 3.295

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