Literature DB >> 20379136

Nuclear deadenylation/polyadenylation factors regulate 3' processing in response to DNA damage.

Murat A Cevher1, Xiaokan Zhang, Sully Fernandez, Sergey Kim, Jorge Baquero, Per Nilsson, Sean Lee, Anders Virtanen, Frida E Kleiman.   

Abstract

We previously showed that mRNA 3' end cleavage reaction in cell extracts is strongly but transiently inhibited under DNA-damaging conditions. The cleavage stimulation factor-50 (CstF-50) has a role in this response, providing a link between transcription-coupled RNA processing and DNA repair. In this study, we show that CstF-50 interacts with nuclear poly(A)-specific ribonuclease (PARN) using in vitro and in extracts of UV-exposed cells. The CstF-50/PARN complex formation has a role in the inhibition of 3' cleavage and activation of deadenylation upon DNA damage. Extending these results, we found that the tumour suppressor BARD1, which is involved in the UV-induced inhibition of 3' cleavage, strongly activates deadenylation by PARN in the presence of CstF-50, and that CstF-50/BARD1 can revert the cap-binding protein-80 (CBP80)-mediated inhibition of PARN activity. We also provide evidence that PARN along with the CstF/BARD1 complex participates in the regulation of endogenous transcripts under DNA-damaging conditions. We speculate that the interplay between polyadenylation, deadenylation and tumour-suppressor factors might prevent the expression of prematurely terminated messengers, contributing to control of gene expression under different cellular conditions.

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Year:  2010        PMID: 20379136      PMCID: PMC2876964          DOI: 10.1038/emboj.2010.59

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  61 in total

1.  Functional interaction of BRCA1-associated BARD1 with polyadenylation factor CstF-50.

Authors:  F E Kleiman; J L Manley
Journal:  Science       Date:  1999-09-03       Impact factor: 47.728

2.  Alternative polyadenylation events contribute to the induction of NF-ATc in effector T cells.

Authors:  S Chuvpilo; M Zimmer; A Kerstan; J Glöckner; A Avots; C Escher; C Fischer; I Inashkina; E Jankevics; F Berberich-Siebelt; E Schmitt; E Serfling
Journal:  Immunity       Date:  1999-02       Impact factor: 31.745

Review 3.  Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.

Authors:  J Zhao; L Hyman; C Moore
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

4.  BRCA1/BARD1 inhibition of mRNA 3' processing involves targeted degradation of RNA polymerase II.

Authors:  Frida E Kleiman; Foon Wu-Baer; Danae Fonseca; Syuzo Kaneko; Richard Baer; James L Manley
Journal:  Genes Dev       Date:  2005-05-15       Impact factor: 11.361

5.  The deadenylating nuclease (DAN) is involved in poly(A) tail removal during the meiotic maturation of Xenopus oocytes.

Authors:  C G Körner; M Wormington; M Muckenthaler; S Schneider; E Dehlin; E Wahle
Journal:  EMBO J       Date:  1998-09-15       Impact factor: 11.598

6.  Deregulation of poly(A) polymerase interferes with cell growth.

Authors:  W Zhao; J L Manley
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

7.  Levels of polyadenylation factor CstF-64 control IgM heavy chain mRNA accumulation and other events associated with B cell differentiation.

Authors:  Y Takagaki; J L Manley
Journal:  Mol Cell       Date:  1998-12       Impact factor: 17.970

8.  Inhibition of RNA polymerase II as a trigger for the p53 response.

Authors:  M Ljungman; F Zhang; F Chen; A J Rainbow; B C McKay
Journal:  Oncogene       Date:  1999-01-21       Impact factor: 9.867

9.  The C-terminal domain of RNA polymerase II couples mRNA processing to transcription.

Authors:  S McCracken; N Fong; K Yankulov; S Ballantyne; G Pan; J Greenblatt; S D Patterson; M Wickens; D L Bentley
Journal:  Nature       Date:  1997-01-23       Impact factor: 49.962

Review 10.  The Fos family of transcription factors and their role in tumourigenesis.

Authors:  Karin Milde-Langosch
Journal:  Eur J Cancer       Date:  2005-09-30       Impact factor: 9.162

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  34 in total

Review 1.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

2.  Essential role for the interaction between hnRNP H/F and a G quadruplex in maintaining p53 pre-mRNA 3'-end processing and function during DNA damage.

Authors:  Adrien Decorsière; Anne Cayrel; Stéphan Vagner; Stefania Millevoi
Journal:  Genes Dev       Date:  2011-02-01       Impact factor: 11.361

3.  Maturation of mammalian H/ACA box snoRNAs: PAPD5-dependent adenylation and PARN-dependent trimming.

Authors:  Heike Berndt; Christiane Harnisch; Christiane Rammelt; Nadine Stöhr; Anne Zirkel; Juliane C Dohm; Heinz Himmelbauer; Joao-Paulo Tavanez; Stefan Hüttelmaier; Elmar Wahle
Journal:  RNA       Date:  2012-03-22       Impact factor: 4.942

4.  Nucleolin phosphorylation regulates PARN deadenylase activity during cellular stress response.

Authors:  Xiaokan Zhang; Shu Xiao; Rachele Dolce Rameau; Emral Devany; Zaineb Nadeem; Elif Caglar; Kenneth Ng; Frida Esther Kleiman; Anjana Saxena
Journal:  RNA Biol       Date:  2017-12-15       Impact factor: 4.652

5.  Hexameric architecture of CstF supported by CstF-50 homodimerization domain structure.

Authors:  María Moreno-Morcillo; Lionel Minvielle-Sébastia; Cameron Mackereth; Sébastien Fribourg
Journal:  RNA       Date:  2011-01-13       Impact factor: 4.942

6.  Poly(A)-specific ribonuclease deficiency impacts telomere biology and causes dyskeratosis congenita.

Authors:  Hemanth Tummala; Amanda Walne; Laura Collopy; Shirleny Cardoso; Josu de la Fuente; Sarah Lawson; James Powell; Nicola Cooper; Alison Foster; Shehla Mohammed; Vincent Plagnol; Thomas Vulliamy; Inderjeet Dokal
Journal:  J Clin Invest       Date:  2015-04-20       Impact factor: 14.808

7.  mRNA deadenylation and telomere disease.

Authors:  Philip J Mason; Monica Bessler
Journal:  J Clin Invest       Date:  2015-04-20       Impact factor: 14.808

Review 8.  Kiss your tail goodbye: the role of PARN, Nocturnin, and Angel deadenylases in mRNA biology.

Authors:  Alan R Godwin; Shihoko Kojima; Carla B Green; Jeffrey Wilusz
Journal:  Biochim Biophys Acta       Date:  2012-12-26

9.  Nucleophosmin deposition during mRNA 3' end processing influences poly(A) tail length.

Authors:  Fumihiko Sagawa; Hend Ibrahim; Angela L Morrison; Carol J Wilusz; Jeffrey Wilusz
Journal:  EMBO J       Date:  2011-08-05       Impact factor: 11.598

10.  MLH1-deficient HCT116 colon tumor cells exhibit resistance to the cytostatic and cytotoxic effect of the poly(A) polymerase inhibitor cordycepin (3'-deoxyadenosine) in vitro.

Authors:  Patrick Imesch; Anouk Goerens; Daniel Fink; André Fedier
Journal:  Oncol Lett       Date:  2011-12-01       Impact factor: 2.967

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