Literature DB >> 9736620

The deadenylating nuclease (DAN) is involved in poly(A) tail removal during the meiotic maturation of Xenopus oocytes.

C G Körner1, M Wormington, M Muckenthaler, S Schneider, E Dehlin, E Wahle.   

Abstract

Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs and is also used to silence certain maternal mRNAs translationally during oocyte maturation and early embryonic development. We previously described the purification of a poly(A)-specific 3'-exoribonuclease (deadenylating nuclease, DAN) from mammalian tissue. Here, the isolation and functional characterization of cDNA clones encoding human DAN is reported. Recombinant DAN overexpressed in Escherichia coli has properties similar to those of the authentic protein. The amino acid sequence of DAN shows homology to the RNase D family of 3'-exonucleases. DAN appears to be localized in both the nucleus and the cytoplasm. It is not stably associated with polysomes or ribosomal subunits. Xenopus oocytes contain nuclear and cytoplasmic DAN isoforms, both of which are closely related to the human DAN. Anti-DAN antibody microinjected into oocytes inhibits default deadenylation during progesterone-induced maturation. Ectopic expression of human DAN in enucleated oocytes rescues maturation-specific deadenylation, indicating that amphibian and mammalian DANs are functionally equivalent.

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Year:  1998        PMID: 9736620      PMCID: PMC1170868          DOI: 10.1093/emboj/17.18.5427

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  70 in total

Review 1.  Function and structure relationships in DNA polymerases.

Authors:  C M Joyce; T A Steitz
Journal:  Annu Rev Biochem       Date:  1994       Impact factor: 23.643

2.  The genomic analysis of human DAN gene.

Authors:  T Ozaki; H Enomoto; Y Nakamura; K Kondo; N Seki; M Ohira; N Nomura; M Ohki; A Nakagawara; S Sakiyama
Journal:  DNA Cell Biol       Date:  1997-09       Impact factor: 3.311

3.  AU-rich elements target small nuclear RNAs as well as mRNAs for rapid degradation.

Authors:  X C Fan; V E Myer; J A Steitz
Journal:  Genes Dev       Date:  1997-10-01       Impact factor: 11.361

4.  The glucocorticoid receptor is associated with the RNA-binding nuclear matrix protein hnRNP U.

Authors:  M Eggert; J Michel; S Schneider; H Bornfleth; A Baniahmad; F O Fackelmayer; S Schmidt; R Renkawitz
Journal:  J Biol Chem       Date:  1997-11-07       Impact factor: 5.157

5.  The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains.

Authors:  M J Moser; W R Holley; A Chatterjee; I S Mian
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Poly(A)- and poly(U)-specific RNA 3' tail shortening by E. coli ribonuclease E.

Authors:  H Huang; J Liao; S N Cohen
Journal:  Nature       Date:  1998-01-01       Impact factor: 49.962

7.  AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A).

Authors:  C A Lagnado; C Y Brown; G J Goodall
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

8.  The nonamer UUAUUUAUU is the key AU-rich sequence motif that mediates mRNA degradation.

Authors:  A M Zubiaga; J G Belasco; M E Greenberg
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

9.  Polyadenylylation helps regulate mRNA decay in Escherichia coli.

Authors:  E B O'Hara; J A Chekanova; C A Ingle; Z R Kushner; E Peters; S R Kushner
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

10.  RNA degradation in Escherichia coli regulated by 3' adenylation and 5' phosphorylation.

Authors:  F Xu; S N Cohen
Journal:  Nature       Date:  1995-03-09       Impact factor: 49.962

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  89 in total

1.  Three conserved members of the RNase D family have unique and overlapping functions in the processing of 5S, 5.8S, U4, U5, RNase MRP and RNase P RNAs in yeast.

Authors:  A van Hoof; P Lennertz; R Parker
Journal:  EMBO J       Date:  2000-03-15       Impact factor: 11.598

2.  Identification of an erythroid-enriched endoribonuclease activity involved in specific mRNA cleavage.

Authors:  Z Wang; M Kiledjian
Journal:  EMBO J       Date:  2000-01-17       Impact factor: 11.598

3.  Zygotic regulation of maternal cyclin A1 and B2 mRNAs.

Authors:  Y Audic; C Anderson; R Bhatty; R S Hartley
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

Review 4.  Exoribonuclease superfamilies: structural analysis and phylogenetic distribution.

Authors:  Y Zuo; M P Deutscher
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

5.  Interaction between a poly(A)-specific ribonuclease and the 5' cap influences mRNA deadenylation rates in vitro.

Authors:  M Gao; D T Fritz; L P Ford; J Wilusz
Journal:  Mol Cell       Date:  2000-03       Impact factor: 17.970

6.  Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region.

Authors:  H Irmer; C Clayton
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

7.  Comparative genomics and evolution of proteins involved in RNA metabolism.

Authors:  Vivek Anantharaman; Eugene V Koonin; L Aravind
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

Review 8.  Cytoplasmic polyadenylation in development and beyond.

Authors:  J D Richter
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

Review 9.  Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.

Authors:  J Zhao; L Hyman; C Moore
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

10.  Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing.

Authors:  Robert P Igo; David S Weston; Nancy Lewis Ernst; Aswini K Panigrahi; Reza Salavati; Kenneth Stuart
Journal:  Eukaryot Cell       Date:  2002-02
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