Literature DB >> 20351886

STRIDE--An integrated standards-based translational research informatics platform.

Henry J Lowe1, Todd A Ferris, Penni M Hernandez, Susan C Weber.   

Abstract

STRIDE (Stanford Translational Research Integrated Database Environment) is a research and development project at Stanford University to create a standards-based informatics platform supporting clinical and translational research. STRIDE consists of three integrated components: a clinical data warehouse, based on the HL7 Reference Information Model (RIM), containing clinical information on over 1.3 million pediatric and adult patients cared for at Stanford University Medical Center since 1995; an application development framework for building research data management applications on the STRIDE platform and a biospecimen data management system. STRIDE's semantic model uses standardized terminologies, such as SNOMED, RxNorm, ICD and CPT, to represent important biomedical concepts and their relationships. The system is in daily use at Stanford and is an important component of Stanford University's CTSA (Clinical and Translational Science Award) Informatics Program.

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Year:  2009        PMID: 20351886      PMCID: PMC2815452     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  14 in total

1.  Using binning to maintain confidentiality of medical data.

Authors:  Zhen Lin; Michael Hewett; Russ B Altman
Journal:  Proc AMIA Symp       Date:  2002

2.  Mapping from a clinical data warehouse to the HL7 Reference Information Model.

Authors:  Jason A Lyman; Ken Scully; Steve Tropello; James Boyd; Jason Dalton; Sandra Pelletier; Csaba Egyhazy
Journal:  AMIA Annu Symp Proc       Date:  2003

3.  Breaking the translational barriers: the value of integrating biomedical informatics and translational research.

Authors:  Philip R O Payne; Stephen B Johnson; Justin B Starren; Hugh H Tilson; David Dowdy
Journal:  J Investig Med       Date:  2005-05       Impact factor: 2.895

4.  Architecture of the open-source clinical research chart from Informatics for Integrating Biology and the Bedside.

Authors:  Shawn N Murphy; Michael Mendis; Kristel Hackett; Rajesh Kuttan; Wensong Pan; Lori C Phillips; Vivian Gainer; David Berkowicz; John P Glaser; Isaac Kohane; Henry C Chueh
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

5.  Use of informatics and information technologies in the clinical research enterprise within US academic medical centers: progress and challenges from 2005 to 2007.

Authors:  Robert DiLaura; Fran Turisco; Cherri McGrew; Stephanie Reel; John Glaser; William F Crowley
Journal:  J Investig Med       Date:  2008-06       Impact factor: 2.895

6.  Perspectives for medical informatics. Reusing the electronic medical record for clinical research.

Authors:  H U Prokosch; T Ganslandt
Journal:  Methods Inf Med       Date:  2009       Impact factor: 2.176

7.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

8.  Signposts along the NIH roadmap for reengineering clinical research: lessons from the Clinical Research Networks initiative.

Authors:  Robert L Williams; Stephen B Johnson; Sarah M Greene; Eric B Larson; Lee A Green; Alan Morris; Dennis Confer; Gregory Reaman; Rosemary Madigan; James Kahn
Journal:  Arch Intern Med       Date:  2008-09-22

9.  Visual query tool for finding patient cohorts from a clinical data warehouse of the partners HealthCare system

Authors: 
Journal:  Proc AMIA Symp       Date:  2000

10.  Central challenges facing the national clinical research enterprise.

Authors:  Nancy S Sung; William F Crowley; Myron Genel; Patricia Salber; Lewis Sandy; Louis M Sherwood; Stephen B Johnson; Veronica Catanese; Hugh Tilson; Kenneth Getz; Elaine L Larson; David Scheinberg; E Albert Reece; Harold Slavkin; Adrian Dobs; Jack Grebb; Rick A Martinez; Allan Korn; David Rimoin
Journal:  JAMA       Date:  2003-03-12       Impact factor: 56.272

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  202 in total

1.  Comparison of parenteral treatments of acute primary headache in a large academic emergency department cohort.

Authors:  Lucas H McCarthy; Robert P Cowan
Journal:  Cephalalgia       Date:  2014-11-03       Impact factor: 6.292

2.  Learning Effective Treatment Pathways for Type-2 Diabetes from a clinical data warehouse.

Authors:  Rohit Vashisht; Ken Jung; Nigam Shah
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

3.  Social network analysis of physician interactions: the effect of institutional boundaries on breast cancer care.

Authors:  Will Bridewell; Amar K Das
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

4.  The design and implementation of an open-source, data-driven cohort recruitment system: the Duke Integrated Subject Cohort and Enrollment Research Network (DISCERN).

Authors:  Jeffrey M Ferranti; William Gilbert; Jonathan McCall; Howard Shang; Tanya Barros; Monica M Horvath
Journal:  J Am Med Inform Assoc       Date:  2011-09-23       Impact factor: 4.497

5.  Using a statistical natural language Parser augmented with the UMLS specialist lexicon to assign SNOMED CT codes to anatomic sites and pathologic diagnoses in full text pathology reports.

Authors:  Henry J Lowe; Yang Huang; Donald P Regula
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

6.  A method for systematic discovery of adverse drug events from clinical notes.

Authors:  Guan Wang; Kenneth Jung; Rainer Winnenburg; Nigam H Shah
Journal:  J Am Med Inform Assoc       Date:  2015-07-31       Impact factor: 4.497

Review 7.  Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research.

Authors:  Jie Xu; Luke V Rasmussen; Pamela L Shaw; Guoqian Jiang; Richard C Kiefer; Huan Mo; Jennifer A Pacheco; Peter Speltz; Qian Zhu; Joshua C Denny; Jyotishman Pathak; William K Thompson; Enid Montague
Journal:  J Am Med Inform Assoc       Date:  2015-07-29       Impact factor: 4.497

8.  DYNAMICALLY EVOLVING CLINICAL PRACTICES AND IMPLICATIONS FOR PREDICTING MEDICAL DECISIONS.

Authors:  Jonathan H Chen; Mary K Goldstein; Steven M Asch; Russ B Altman
Journal:  Pac Symp Biocomput       Date:  2016

9.  Provision of Transition Education and Referral Patterns from Pediatric Cardiology to Adult Cardiac Care.

Authors:  Anna L Harbison; Stafford Grady; Kevin Chi; Susan M Fernandes
Journal:  Pediatr Cardiol       Date:  2015-09-18       Impact factor: 1.655

10.  Easily configured real-time CPOE Pick Off Tool supporting focused clinical research and quality improvement.

Authors:  Benjamin P Rosenbaum; Nikolay Silkin; Randolph A Miller
Journal:  J Am Med Inform Assoc       Date:  2013-11-28       Impact factor: 4.497

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