Literature DB >> 26776186

DYNAMICALLY EVOLVING CLINICAL PRACTICES AND IMPLICATIONS FOR PREDICTING MEDICAL DECISIONS.

Jonathan H Chen1, Mary K Goldstein, Steven M Asch, Russ B Altman.   

Abstract

Automatically data-mining clinical practice patterns from electronic health records (EHR) can enable prediction of future practices as a form of clinical decision support (CDS). Our objective is to determine the stability of learned clinical practice patterns over time and what implication this has when using varying longitudinal historical data sources towards predicting future decisions. We trained an association rule engine for clinical orders (e.g., labs, imaging, medications) using structured inpatient data from a tertiary academic hospital. Comparing top order associations per admission diagnosis from training data in 2009 vs. 2012, we find practice variability from unstable diagnoses with rank biased overlap (RBO)<0.35 (e.g., pneumonia) to stable admissions for planned procedures (e.g., chemotherapy, surgery) with comparatively high RBO>0.6. Predicting admission orders for future (2013) patients with associations trained on recent (2012) vs. older (2009) data improved accuracy evaluated by area under the receiver operating characteristic curve (ROC-AUC) 0.89 to 0.92, precision at ten (positive predictive value of the top ten predictions against actual orders) 30% to 37%, and weighted recall (sensitivity) at ten 2.4% to 13%, (P<10(-10)). Training with more longitudinal data (2009-2012) was no better than only using recent (2012) data. Secular trends in practice patterns likely explain why smaller but more recent training data is more accurate at predicting future practices.

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Year:  2016        PMID: 26776186      PMCID: PMC4719775     

Source DB:  PubMed          Journal:  Pac Symp Biocomput        ISSN: 2335-6928


  35 in total

1.  Big data meets the electronic medical record: a commentary on "identifying patients at increased risk for unplanned readmission".

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Journal:  Med Care       Date:  2013-09       Impact factor: 2.983

2.  Health information technology: standards, implementation specifications, and certification criteria for electronic health record technology, 2014 edition; revisions to the permanent certification program for health information technology. Final rule.

Authors: 
Journal:  Fed Regist       Date:  2012-09-04

3.  A method to compute treatment suggestions from local order entry data.

Authors:  Jeffrey Klann; Gunther Schadow; Stephen M Downs
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

4.  The use of sequential pattern mining to predict next prescribed medications.

Authors:  Aileen P Wright; Adam T Wright; Allison B McCoy; Dean F Sittig
Journal:  J Biomed Inform       Date:  2014-09-16       Impact factor: 6.317

5.  Paving the COWpath: data-driven design of pediatric order sets.

Authors:  Yiye Zhang; Rema Padman; James E Levin
Journal:  J Am Med Inform Assoc       Date:  2014-03-27       Impact factor: 4.497

6.  Distribution of Problems, Medications and Lab Results in Electronic Health Records: The Pareto Principle at Work.

Authors:  Adam Wright; David W Bates
Journal:  Appl Clin Inform       Date:  2010       Impact factor: 2.342

7.  Big data and new knowledge in medicine: the thinking, training, and tools needed for a learning health system.

Authors:  Harlan M Krumholz
Journal:  Health Aff (Millwood)       Date:  2014-07       Impact factor: 6.301

8.  Big data in health care: using analytics to identify and manage high-risk and high-cost patients.

Authors:  David W Bates; Suchi Saria; Lucila Ohno-Machado; Anand Shah; Gabriel Escobar
Journal:  Health Aff (Millwood)       Date:  2014-07       Impact factor: 6.301

9.  Building the graph of medicine from millions of clinical narratives.

Authors:  Samuel G Finlayson; Paea LePendu; Nigam H Shah
Journal:  Sci Data       Date:  2014-09-16       Impact factor: 6.444

10.  Mining for clinical expertise in (undocumented) order sets to power an order suggestion system.

Authors:  Jonathan H Chen; Russ B Altman
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2013-03-18
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  4 in total

1.  An evaluation of clinical order patterns machine-learned from clinician cohorts stratified by patient mortality outcomes.

Authors:  Jason K Wang; Jason Hom; Santhosh Balasubramanian; Alejandro Schuler; Nigam H Shah; Mary K Goldstein; Michael T M Baiocchi; Jonathan H Chen
Journal:  J Biomed Inform       Date:  2018-09-07       Impact factor: 6.317

2.  METHODS TO ENHANCE THE REPRODUCIBILITY OF PRECISION MEDICINE.

Authors:  Arjun K Manrai; Chirag J Patel; Nils Gehlenborg; Nicholas P Tatonetti; John P A Ioannidis; Isaac S Kohane
Journal:  Pac Symp Biocomput       Date:  2016

3.  Inpatient Clinical Order Patterns Machine-Learned From Teaching Versus Attending-Only Medical Services.

Authors:  Jason K Wang; Alejandro Schuler; Nigam H Shah; Michael T M Baiocchi; Jonathan H Chen
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2018-05-18

4.  Association model data learned from clinicians stratified by patient mortality outcomes at a Tertiary Academic Center.

Authors:  Jason K Wang; Jason Hom; Santhosh Balasubramanian; Jonathan H Chen
Journal:  Data Brief       Date:  2018-11-02
  4 in total

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