Literature DB >> 2025226

Studies on the mechanism of hydroxymethylbilane synthase concerning the role of arginine residues in substrate binding.

M Lander1, A R Pitt, P R Alefounder, D Bardy, C Abell, A R Battersby.   

Abstract

The role of conserved arginine residues in hydroxymethylbilane synthase was investigated by replacing these residues in the enzyme from Escherichia coli with leucine residues by using site-directed mutagenesis. The kinetic parameters for these mutant enzymes and studies on the formation of intermediate enzyme-substrate complexes indicate that several of these arginine residues are involved in binding the carboxylate side chains of the pyrromethane cofactor and the growing oligopyrrole chain.

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Year:  1991        PMID: 2025226      PMCID: PMC1150073          DOI: 10.1042/bj2750447

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  19 in total

1.  Evidence for a dipyrromethane cofactor at the catalytic site of E. coli porphobilinogen deaminase.

Authors:  P M Jordan; M J Warren
Journal:  FEBS Lett       Date:  1987-12-10       Impact factor: 4.124

2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

3.  Purification, N-terminal amino acid sequence and properties of hydroxymethylbilane synthase (porphobilinogen deaminase) from Escherichia coli.

Authors:  G J Hart; C Abell; A R Battersby
Journal:  Biochem J       Date:  1986-11-15       Impact factor: 3.857

Review 4.  The biosynthesis of porphyrins, chlorophylls, and vitamin B12.

Authors:  F J Leeper
Journal:  Nat Prod Rep       Date:  1985-02       Impact factor: 13.423

Review 5.  The biosynthesis of porphyrins, chlorophylls, and vitamin B12.

Authors:  F J Leeper
Journal:  Nat Prod Rep       Date:  1985-12       Impact factor: 13.423

6.  Molecular cloning and sequencing of the hemD gene of Escherichia coli K-12 and preliminary data on the Uro operon.

Authors:  A Sasarman; A Nepveu; Y Echelard; J Dymetryszyn; M Drolet; C Goyer
Journal:  J Bacteriol       Date:  1987-09       Impact factor: 3.490

7.  Nucleotide sequence of the hemC locus encoding porphobilinogen deaminase of Escherichia coli K12.

Authors:  S D Thomas; P M Jordan
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

8.  Arginyl residues: anion recognition sites in enzymes.

Authors:  J F Riordan; K D McElvany; C L Borders
Journal:  Science       Date:  1977-03-04       Impact factor: 47.728

9.  Alternative transcription and splicing of the human porphobilinogen deaminase gene result either in tissue-specific or in housekeeping expression.

Authors:  S Chretien; A Dubart; D Beaupain; N Raich; B Grandchamp; J Rosa; M Goossens; P H Romeo
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

10.  Molecular cloning and complete primary sequence of human erythrocyte porphobilinogen deaminase.

Authors:  N Raich; P H Romeo; A Dubart; D Beaupain; M Cohen-Solal; M Goossens
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

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  17 in total

1.  Homozygous acute intermittent porphyria: compound heterozygosity for adjacent base transitions in the same codon of the porphobilinogen deaminase gene.

Authors:  D H Llewellyn; S J Smyth; G H Elder; A C Hutchesson; J M Rattenbury; M F Smith
Journal:  Hum Genet       Date:  1992-04       Impact factor: 4.132

2.  Mutagenesis of arginine residues in the catalytic cleft of Escherichia coli porphobilinogen deaminase that affects dipyrromethane cofactor assembly and tetrapyrrole chain initiation and elongation.

Authors:  P M Jordan; S C Woodcock
Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

Review 3.  Porphobilinogen deaminase and uroporphyrinogen III synthase: structure, molecular biology, and mechanism.

Authors:  P M Shoolingin-Jordan
Journal:  J Bioenerg Biomembr       Date:  1995-04       Impact factor: 2.945

4.  Discovery that the assembly of the dipyrromethane cofactor of porphobilinogen deaminase holoenzyme proceeds initially by the reaction of preuroporphyrinogen with the apoenzyme.

Authors:  P M Shoolingin-Jordan; M J Warren; S J Awan
Journal:  Biochem J       Date:  1996-06-01       Impact factor: 3.857

Review 5.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

Review 6.  The three-dimensional structures of mutants of porphobilinogen deaminase: toward an understanding of the structural basis of acute intermittent porphyria.

Authors:  P D Brownlie; R Lambert; G V Louie; P M Jordan; T L Blundell; M J Warren; J B Cooper; S P Wood
Journal:  Protein Sci       Date:  1994-10       Impact factor: 6.725

7.  Structural studies of domain movement in active-site mutants of porphobilinogen deaminase from Bacillus megaterium.

Authors:  Jingxu Guo; Peter Erskine; Alun R Coker; Steve P Wood; Jonathan B Cooper
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-10-30       Impact factor: 1.056

Review 8.  Porphobilinogen deaminase gene structure and molecular defects.

Authors:  J C Deybach; H Puy
Journal:  J Bioenerg Biomembr       Date:  1995-04       Impact factor: 2.945

9.  Purification and properties of porphobilinogen deaminase from Arabidopsis thaliana.

Authors:  R M Jones; P M Jordan
Journal:  Biochem J       Date:  1994-05-01       Impact factor: 3.857

Review 10.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12
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