Literature DB >> 3529035

Nucleotide sequence of the hemC locus encoding porphobilinogen deaminase of Escherichia coli K12.

S D Thomas, P M Jordan.   

Abstract

Porphobilinogen deaminase, the product of the hemC locus in Escherichia coli K12, catalyses the tetrapolymerisation of porphobilinogen (PBG) into the hydroxymethylbilane, preuroporphyrinogen. The hemC locus has been subcloned from the Clarke and Carbon plasmid pLC41-4. The sequence of the hemC structural gene and flanking DNA was determined by the dideoxy chain termination method of Sanger. The structural gene for hemC is located within a 942bp sequence encoding the monomeric PBG deaminase, molecular weight 33,857. The extent of the coding region was confirmed by sequencing the N-terminus of the purified enzyme and by determination of the molecular weight. The hemC locus is closely linked to the cyaA locus, the genes being transcribed in a divergent manner. Upstream of the hemC coding region, a possible promoter and three repeated GGATG sequences were identified. This is the first report of a complete DNA sequence for a structural gene specifying an enzyme of the heme biosynthetic pathway in prokaryotes.

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Year:  1986        PMID: 3529035      PMCID: PMC311632          DOI: 10.1093/nar/14.15.6215

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  32 in total

1.  A freeze-squeeze method for recovering long DNA from agarose gels.

Authors:  R W Thuring; J P Sanders; P Borst
Journal:  Anal Biochem       Date:  1975-05-26       Impact factor: 3.365

Review 2.  Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors:  M Rosenberg; D Court
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

3.  Mutants of Escherichia coli K12 accumulating porphobilinogen: a new locus, hemC.

Authors:  M L McConville; H P Charles
Journal:  J Gen Microbiol       Date:  1979-03

4.  A complementation analysis of the restriction and modification of DNA in Escherichia coli.

Authors:  H W Boyer; D Roulland-Dussoix
Journal:  J Mol Biol       Date:  1969-05-14       Impact factor: 5.469

5.  A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome.

Authors:  L Clarke; J Carbon
Journal:  Cell       Date:  1976-09       Impact factor: 41.582

6.  Complete amino acid sequence of porcine heart citrate synthase.

Authors:  D P Bloxham; D C Parmelee; S Kumar; K A Walsh; K Titani
Journal:  Biochemistry       Date:  1982-04-27       Impact factor: 3.162

7.  The nucleotide sequence of the HEM1 gene and evidence for a precursor form of the mitochondrial 5-aminolevulinate synthase in Saccharomyces cerevisiae.

Authors:  D Urban-Grimal; C Volland; T Garnier; P Dehoux; R Labbe-Bois
Journal:  Eur J Biochem       Date:  1986-05-02

8.  Purification of porphobilinogen deaminase from Euglena gracilis and studies of its kinetics.

Authors:  D C Williams; G S Morgan; E McDonald; A R Battersby
Journal:  Biochem J       Date:  1981-01-01       Impact factor: 3.857

9.  Analysis of the 5' regulatory region of the gene for delta-aminolevulinic acid synthetase of Rhizobium meliloti.

Authors:  S A Leong; P H Williams; G S Ditta
Journal:  Nucleic Acids Res       Date:  1985-08-26       Impact factor: 16.971

Review 10.  Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes.

Authors:  H Grosjean; W Fiers
Journal:  Gene       Date:  1982-06       Impact factor: 3.688

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  44 in total

1.  Purification and properties of uroporphyrinogen III synthase (co-synthase) from an overproducing recombinant strain of Escherichia coli K-12.

Authors:  A F Alwan; B I Mgbeje; P M Jordan
Journal:  Biochem J       Date:  1989-12-01       Impact factor: 3.857

2.  High frequency of mutations in exon 10 of the porphobilinogen deaminase gene in patients with a CRIM-positive subtype of acute intermittent porphyria.

Authors:  X F Gu; F de Rooij; G Voortman; K Te Velde; Y Nordmann; B Grandchamp
Journal:  Am J Hum Genet       Date:  1992-09       Impact factor: 11.025

3.  Mutagenesis of arginine residues in the catalytic cleft of Escherichia coli porphobilinogen deaminase that affects dipyrromethane cofactor assembly and tetrapyrrole chain initiation and elongation.

Authors:  P M Jordan; S C Woodcock
Journal:  Biochem J       Date:  1991-12-01       Impact factor: 3.857

Review 4.  Porphobilinogen deaminase and uroporphyrinogen III synthase: structure, molecular biology, and mechanism.

Authors:  P M Shoolingin-Jordan
Journal:  J Bioenerg Biomembr       Date:  1995-04       Impact factor: 2.945

5.  Discovery that the assembly of the dipyrromethane cofactor of porphobilinogen deaminase holoenzyme proceeds initially by the reaction of preuroporphyrinogen with the apoenzyme.

Authors:  P M Shoolingin-Jordan; M J Warren; S J Awan
Journal:  Biochem J       Date:  1996-06-01       Impact factor: 3.857

Review 6.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

7.  Evidence that pyridoxal phosphate modification of lysine residues (Lys-55 and Lys-59) causes inactivation of hydroxymethylbilane synthase (porphobilinogen deaminase).

Authors:  A D Miller; L C Packman; G J Hart; P R Alefounder; C Abell; A R Battersby
Journal:  Biochem J       Date:  1989-08-15       Impact factor: 3.857

8.  Subcellular location of the tetrapyrrole synthesis enzyme porphobilinogen deaminase in higher plants: an immunological investigation.

Authors:  M Witty; R M Jones; M S Robb; P M Jordan; A G Smith
Journal:  Planta       Date:  1996       Impact factor: 4.116

9.  Isolation and nucleotide sequence of the hemA gene of Escherichia coli K12.

Authors:  M Drolet; L Péloquin; Y Echelard; L Cousineau; A Sasarman
Journal:  Mol Gen Genet       Date:  1989-04

10.  Purification and properties of porphobilinogen deaminase from Arabidopsis thaliana.

Authors:  R M Jones; P M Jordan
Journal:  Biochem J       Date:  1994-05-01       Impact factor: 3.857

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