Literature DB >> 20237019

Dynamic nucleocytoplasmic shuttling of an Arabidopsis SR splicing factor: role of the RNA-binding domains.

Glwadys Rausin1, Vinciane Tillemans, Nancy Stankovic, Marc Hanikenne, Patrick Motte.   

Abstract

Serine/arginine-rich (SR) proteins are essential nuclear-localized splicing factors. We have investigated the dynamic subcellular distribution of the Arabidopsis (Arabidopsis thaliana) RSZp22 protein, a homolog of the human 9G8 SR factor. Little is known about the determinants underlying the control of plant SR protein dynamics, and so far most studies relied on ectopic transient overexpression. Here, we provide a detailed analysis of the RSZp22 expression profile and describe its nucleocytoplasmic shuttling properties in specific cell types. Comparison of transient ectopic- and stable tissue-specific expression highlights the advantages of both approaches for nuclear protein dynamic studies. By site-directed mutagenesis of RSZp22 RNA-binding sequences, we show that functional RNA recognition motif RNP1 and zinc-knuckle are dispensable for the exclusive protein nuclear localization and speckle-like distribution. Fluorescence resonance energy transfer imaging also revealed that these motifs are implicated in RSZp22 molecular interactions. Furthermore, the RNA-binding motif mutants are defective for their export through the CRM1/XPO1/Exportin-1 receptor pathway but retain nucleocytoplasmic mobility. Moreover, our data suggest that CRM1 is a putative export receptor for mRNPs in plants.

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Year:  2010        PMID: 20237019      PMCID: PMC2862426          DOI: 10.1104/pp.110.154740

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  68 in total

1.  The splicing factors 9G8 and SRp20 transactivate splicing through different and specific enhancers.

Authors:  Y Cavaloc; C F Bourgeois; L Kister; J Stévenin
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

2.  Involvement of SR proteins in mRNA surveillance.

Authors:  Zuo Zhang; Adrian R Krainer
Journal:  Mol Cell       Date:  2004-11-19       Impact factor: 17.970

3.  A regulatory role for CRM1 in the multi-directional trafficking of splicing snRNPs in the mammalian nucleus.

Authors:  Judith Sleeman
Journal:  J Cell Sci       Date:  2007-04-03       Impact factor: 5.285

4.  The dynamics of a pre-mRNA splicing factor in living cells.

Authors:  T Misteli; J F Cáceres; D L Spector
Journal:  Nature       Date:  1997-05-29       Impact factor: 49.962

5.  A novel family of plant splicing factors with a Zn knuckle motif: examination of RNA binding and splicing activities.

Authors:  S Lopato; R Gattoni; G Fabini; J Stevenin; A Barta
Journal:  Plant Mol Biol       Date:  1999-03       Impact factor: 4.076

6.  Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity.

Authors:  J F Cáceres; T Misteli; G R Screaton; D L Spector; A R Krainer
Journal:  J Cell Biol       Date:  1997-07-28       Impact factor: 10.539

7.  Early flower development in Arabidopsis.

Authors:  D R Smyth; J L Bowman; E M Meyerowitz
Journal:  Plant Cell       Date:  1990-08       Impact factor: 11.277

Review 8.  RNA recognition by RNP proteins during RNA processing.

Authors:  G Varani; K Nagai
Journal:  Annu Rev Biophys Biomol Struct       Date:  1998

9.  qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data.

Authors:  Jan Hellemans; Geert Mortier; Anne De Paepe; Frank Speleman; Jo Vandesompele
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

10.  Functional analysis of pre-mRNA splicing factor SF2/ASF structural domains.

Authors:  J F Cáceres; A R Krainer
Journal:  EMBO J       Date:  1993-12       Impact factor: 11.598

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  20 in total

Review 1.  Localization and dynamics of nuclear speckles in plants.

Authors:  Anireddy S N Reddy; Irene S Day; Janett Göhring; Andrea Barta
Journal:  Plant Physiol       Date:  2011-11-01       Impact factor: 8.340

Review 2.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

3.  Novel role for a serine/arginine-rich splicing factor, AdRSZ21 in plant defense and HR-like cell death.

Authors:  Koppolu Raja Rajesh Kumar; P B Kirti
Journal:  Plant Mol Biol       Date:  2012-09-02       Impact factor: 4.076

Review 4.  Emerging Roles for Phase Separation in Plants.

Authors:  Ryan J Emenecker; Alex S Holehouse; Lucia C Strader
Journal:  Dev Cell       Date:  2020-10-12       Impact factor: 12.270

5.  Dynamic Distribution and Interaction of the Arabidopsis SRSF1 Subfamily Splicing Factors.

Authors:  Nancy Stankovic; Marie Schloesser; Marine Joris; Eric Sauvage; Marc Hanikenne; Patrick Motte
Journal:  Plant Physiol       Date:  2015-12-23       Impact factor: 8.340

Review 6.  A role for SR proteins in plant stress responses.

Authors:  Paula Duque
Journal:  Plant Signal Behav       Date:  2011-01-01

Review 7.  Genome-wide analysis of CCHC-type zinc finger (ZCCHC) proteins in yeast, Arabidopsis, and humans.

Authors:  Uri Aceituno-Valenzuela; Rosa Micol-Ponce; María Rosa Ponce
Journal:  Cell Mol Life Sci       Date:  2020-04-18       Impact factor: 9.261

8.  The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.

Authors:  Hans F Ehrnsberger; Christina Pfaff; Ines Hachani; María Flores-Tornero; Brian B Sørensen; Gernot Längst; Stefanie Sprunck; Marion Grasser; Klaus D Grasser
Journal:  Plant Physiol       Date:  2019-01-30       Impact factor: 8.340

9.  Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome.

Authors:  Cristiane P G Calixto; Wenbin Guo; Allan B James; Nikoleta A Tzioutziou; Juan Carlos Entizne; Paige E Panter; Heather Knight; Hugh G Nimmo; Runxuan Zhang; John W S Brown
Journal:  Plant Cell       Date:  2018-05-15       Impact factor: 11.277

10.  Metal binding to the N-terminal cytoplasmic domain of the PIB ATPase HMA4 is required for metal transport in Arabidopsis.

Authors:  Clémentine Laurent; Gilles Lekeux; Ashwinie A Ukuwela; Zhiguang Xiao; Jean-Benoit Charlier; Bernard Bosman; Monique Carnol; Patrick Motte; Christian Damblon; Moreno Galleni; Marc Hanikenne
Journal:  Plant Mol Biol       Date:  2016-01-21       Impact factor: 4.076

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