Literature DB >> 9646873

RNA recognition by RNP proteins during RNA processing.

G Varani1, K Nagai.   

Abstract

The ribonucleoprotein (RNP) domain is one of the most common eukaryotic protein folds. Proteins containing RNP domains function in important steps of posttranscriptional regulation of gene expression by directing the assembly of multiprotein complexes on primary transcripts, mature mRNAs, and stable ribonucleoprotein components of the RNA processing machinery. The diverse functions performed by these proteins depend on their dual ability to recognize RNA and to interact with other proteins, often utilizing specialized auxiliary domains. Crystallographic and NMR structures of several RNP domains and a handful of structures of RNA-protein complexes have begun to reveal the molecular basis for RNP-RNA recognition.

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Year:  1998        PMID: 9646873     DOI: 10.1146/annurev.biophys.27.1.407

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  106 in total

Review 1.  Recognition of nascent RNA by the human La antigen: conserved and divergent features of structure and function.

Authors:  R J Maraia; R V Intine
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

2.  Delivering messages from the 3' end.

Authors:  G Varani
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-10       Impact factor: 11.205

3.  Molecular dynamics simulations of the complex between human U1A protein and hairpin II of U1 small nuclear RNA and of free RNA in solution.

Authors:  Y Tang; L Nilsson
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

4.  Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin.

Authors:  F H Allain; P Bouvet; T Dieckmann; J Feigon
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

5.  The structure of the mRNA export factor TAP reveals a cis arrangement of a non-canonical RNP domain and an LRR domain.

Authors:  E Liker; E Fernandez; E Izaurralde; E Conti
Journal:  EMBO J       Date:  2000-11-01       Impact factor: 11.598

6.  Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP.

Authors:  G Martin; W Keller; S Doublié
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

7.  Investigation of a conserved stacking interaction in target site recognition by the U1A protein.

Authors:  Jerome C Shiels; Jacob B Tuite; Scott J Nolan; Anne M Baranger
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

Review 8.  RNA-protein interactions that regulate pre-mRNA splicing.

Authors:  Ravinder Singh
Journal:  Gene Expr       Date:  2002

Review 9.  La protein and its associated small nuclear and nucleolar precursor RNAs.

Authors:  Richard J Maraia; Robert V Intine
Journal:  Gene Expr       Date:  2002

10.  Crystal structure of the Drosophila Mago nashi-Y14 complex.

Authors:  Hang Shi; Rui-Ming Xu
Journal:  Genes Dev       Date:  2003-04-15       Impact factor: 11.361

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