Literature DB >> 15546619

Involvement of SR proteins in mRNA surveillance.

Zuo Zhang1, Adrian R Krainer.   

Abstract

Nonsense mutations influence several aspects of gene expression, including mRNA stability and splicing fidelity, but the mechanism by which premature termination codons (PTCs) can apparently affect splice-site selection remains elusive. We used a model human beta-globin gene with duplicated 5' splice sites (5'ss) and found that PTCs inserted between the two 5'ss do not directly influence splicing in this system. Instead, their apparent effect on 5'ss selection in vivo is an indirect result of nonsense-mediated mRNA decay (NMD), as conditions that eliminated NMD also abrogated the effect on splicing. Remarkably, we found an unexpected function of SR proteins in targeting several mRNAs with PTCs to the NMD pathway. Overexpression of various SR proteins strongly enhanced NMD, and this effect required an RS domain. Our data argue against a universal role of PTCs in regulating pre-mRNA splicing and reveal an additional function of SR proteins in eukaryotic gene expression.

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Year:  2004        PMID: 15546619     DOI: 10.1016/j.molcel.2004.10.031

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  95 in total

1.  MicroRNA (miRNA)-mediated interaction between leukemia/lymphoma-related factor (LRF) and alternative splicing factor/splicing factor 2 (ASF/SF2) affects mouse embryonic fibroblast senescence and apoptosis.

Authors:  Lorena Verduci; Marcella Simili; Milena Rizzo; Alberto Mercatanti; Monica Evangelista; Laura Mariani; Giuseppe Rainaldi; Letizia Pitto
Journal:  J Biol Chem       Date:  2010-10-04       Impact factor: 5.157

Review 2.  The exon junction complex as a node of post-transcriptional networks.

Authors:  Hervé Le Hir; Jérôme Saulière; Zhen Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-16       Impact factor: 94.444

Review 3.  The RNAissance family: SR proteins as multifaceted regulators of gene expression.

Authors:  Jonathan M Howard; Jeremy R Sanford
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-08-22       Impact factor: 9.957

4.  Insights into nuclear organization in plants as revealed by the dynamic distribution of Arabidopsis SR splicing factors.

Authors:  Vinciane Tillemans; Isabelle Leponce; Glwadys Rausin; Laurence Dispa; Patrick Motte
Journal:  Plant Cell       Date:  2006-11-17       Impact factor: 11.277

5.  A 3' UTR sequence stabilizes termination codons in the unspliced RNA of Rous sarcoma virus.

Authors:  Jason E Weil; Karen L Beemon
Journal:  RNA       Date:  2005-11-21       Impact factor: 4.942

6.  Multiple properties of the splicing repressor SRp38 distinguish it from typical SR proteins.

Authors:  Chanseok Shin; Frida E Kleiman; James L Manley
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

7.  Coordinated control of splicing and translation.

Authors:  Brenton R Graveley
Journal:  Nat Struct Mol Biol       Date:  2005-12       Impact factor: 15.369

8.  Chironomus tentans-repressor splicing factor represses SR protein function locally on pre-mRNA exons and is displaced at correct splice sites.

Authors:  Petra Björk; Ingela Wetterberg-Strandh; Göran Baurén; Lars Wieslander
Journal:  Mol Biol Cell       Date:  2005-10-19       Impact factor: 4.138

9.  Serine/arginine-rich proteins contribute to negative regulator of splicing element-stimulated polyadenylation in rous sarcoma virus.

Authors:  Nicole L Maciolek; Mark T McNally
Journal:  J Virol       Date:  2007-08-01       Impact factor: 5.103

Review 10.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

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