Literature DB >> 20228802

Dynamic changes in histone acetylation regulate origins of DNA replication.

Ashwin Unnikrishnan1, Philip R Gafken, Toshio Tsukiyama.   

Abstract

Although histone modifications have been implicated in many DNA-dependent processes, their precise role in DNA replication remains largely unknown. Here we describe an efficient single-step method to specifically purify histones located around an origin of replication from Saccharomyces cerevisiae. Using high-resolution MS, we have obtained a comprehensive view of the histone modifications surrounding the origin of replication throughout the cell cycle. We have discovered that acetylation of histone H3 and H4 is dynamically regulated around an origin of replication, at the level of multiply acetylated histones. Furthermore, we find that this acetylation is required for efficient origin activation during S phase.

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Year:  2010        PMID: 20228802      PMCID: PMC3060656          DOI: 10.1038/nsmb.1780

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  60 in total

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4.  Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1.

Authors:  T W Burke; J G Cook; M Asano; J R Nevins
Journal:  J Biol Chem       Date:  2001-01-24       Impact factor: 5.157

5.  The organized chromatin domain of the repressed yeast a cell-specific gene STE6 contains two molecules of the corepressor Tup1p per nucleosome.

Authors:  C E Ducker; R T Simpson
Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

6.  Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus.

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8.  Methods to study replication fork collapse in budding yeast.

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9.  Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: high-resolution mapping of replication origins.

Authors:  J J Wyrick; J G Aparicio; T Chen; J D Barnett; E G Jennings; R A Young; S P Bell; O M Aparicio
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

10.  Replication dynamics of the yeast genome.

Authors:  M K Raghuraman; E A Winzeler; D Collingwood; S Hunt; L Wodicka; A Conway; D J Lockhart; R W Davis; B J Brewer; W L Fangman
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  86 in total

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Review 3.  Regulation of histone modifying enzymes by the ubiquitin-proteasome system.

Authors:  Chunbin Zou; Rama K Mallampalli
Journal:  Biochim Biophys Acta       Date:  2014-01-03

4.  A tale of metabolites: the cross-talk between chromatin and energy metabolism.

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5.  Histone acetyltransferase 1 promotes homologous recombination in DNA repair by facilitating histone turnover.

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Journal:  J Biol Chem       Date:  2013-05-07       Impact factor: 5.157

Review 6.  Nucleosomes in the neighborhood: new roles for chromatin modifications in replication origin control.

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Journal:  Epigenetics       Date:  2011-05-01       Impact factor: 4.528

7.  DNA damage in the presence of chemical genotoxic agents induce acetylation of H3K56 and H4K16 but not H3K9 in mammalian cells.

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Review 8.  Quantitative proteomic analysis of histone modifications.

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9.  Effects of histone deacetylase inhibitory prodrugs on epigenetic changes and DNA damage response in tumor and heart of glioblastoma xenograft.

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Journal:  Invest New Drugs       Date:  2017-03-17       Impact factor: 3.850

10.  ChAP-MS: a method for identification of proteins and histone posttranslational modifications at a single genomic locus.

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