Literature DB >> 25688442

Quantitative proteomic analysis of histone modifications.

He Huang1, Shu Lin2, Benjamin A Garcia2, Yingming Zhao1.   

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Year:  2015        PMID: 25688442      PMCID: PMC4502928          DOI: 10.1021/cr500491u

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


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  607 in total

1.  Partitioning and plasticity of repressive histone methylation states in mammalian chromatin.

Authors:  Antoine H F M Peters; Stefan Kubicek; Karl Mechtler; Roderick J O'Sullivan; Alwin A H A Derijck; Laura Perez-Burgos; Alexander Kohlmaier; Susanne Opravil; Makoto Tachibana; Yoichi Shinkai; Joost H A Martens; Thomas Jenuwein
Journal:  Mol Cell       Date:  2003-12       Impact factor: 17.970

2.  Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4.

Authors:  Michiel Vermeulen; Klaas W Mulder; Sergei Denissov; W W M Pim Pijnappel; Frederik M A van Schaik; Radhika A Varier; Marijke P A Baltissen; Henk G Stunnenberg; Matthias Mann; H Th Marc Timmers
Journal:  Cell       Date:  2007-09-20       Impact factor: 41.582

3.  De novo sequencing methods in proteomics.

Authors:  Christopher Hughes; Bin Ma; Gilles A Lajoie
Journal:  Methods Mol Biol       Date:  2010

4.  A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry.

Authors:  Richard C Baliban; Peter A DiMaggio; Mariana D Plazas-Mayorca; Nicolas L Young; Benjamin A Garcia; Christodoulos A Floudas
Journal:  Mol Cell Proteomics       Date:  2010-01-26       Impact factor: 5.911

5.  Histone H2B phosphorylation in mammalian apoptotic cells. An association with DNA fragmentation.

Authors:  K Ajiro
Journal:  J Biol Chem       Date:  2000-01-07       Impact factor: 5.157

6.  Interaction of 14-3-3 with signaling proteins is mediated by the recognition of phosphoserine.

Authors:  A J Muslin; J W Tanner; P M Allen; A S Shaw
Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

7.  Identification of lysine succinylation as a new post-translational modification.

Authors:  Zhihong Zhang; Minjia Tan; Zhongyu Xie; Lunzhi Dai; Yue Chen; Yingming Zhao
Journal:  Nat Chem Biol       Date:  2010-12-12       Impact factor: 15.040

8.  Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling.

Authors:  Guoqiang Xu; Jeremy S Paige; Samie R Jaffrey
Journal:  Nat Biotechnol       Date:  2010-07-18       Impact factor: 54.908

9.  Histone H1 variant-specific lysine methylation by G9a/KMT1C and Glp1/KMT1D.

Authors:  Thomas Weiss; Sonja Hergeth; Ulrike Zeissler; Annalisa Izzo; Philipp Tropberger; Barry M Zee; Miroslav Dundr; Benjamin A Garcia; Sylvain Daujat; Robert Schneider
Journal:  Epigenetics Chromatin       Date:  2010-03-24       Impact factor: 4.954

10.  Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database.

Authors:  George A Khoury; Richard C Baliban; Christodoulos A Floudas
Journal:  Sci Rep       Date:  2011-09-13       Impact factor: 4.379

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  116 in total

1.  Rapid Histone-Catalyzed DNA Lesion Excision and Accompanying Protein Modification in Nucleosomes and Nucleosome Core Particles.

Authors:  Liwei Weng; Marc M Greenberg
Journal:  J Am Chem Soc       Date:  2015-08-20       Impact factor: 15.419

2.  Reshaping the Chromatin and Epigenetic Landscapes with Quantitative Mass Spectrometry.

Authors:  Michael P Washburn; Yingming Zhao; Benjamin A Garcia
Journal:  Mol Cell Proteomics       Date:  2016-01-26       Impact factor: 5.911

3.  PHF1 Tudor and N-terminal domains synergistically target partially unwrapped nucleosomes to increase DNA accessibility.

Authors:  Matthew D Gibson; Jovylyn Gatchalian; Andrew Slater; Tatiana G Kutateladze; Michael G Poirier
Journal:  Nucleic Acids Res       Date:  2017-04-20       Impact factor: 16.971

Review 4.  Epigenetics and the dynamics of chromatin during adenovirus infections.

Authors:  Kelsey L Lynch; Linda R Gooding; Charlie Garnett-Benson; David A Ornelles; Daphne C Avgousti
Journal:  FEBS Lett       Date:  2019-12-15       Impact factor: 4.124

5.  Emerging Chemistry Strategies for Engineering Native Chromatin.

Authors:  Yael David; Tom W Muir
Journal:  J Am Chem Soc       Date:  2017-06-27       Impact factor: 15.419

Review 6.  Metabolic control of epigenetics in cancer.

Authors:  Adam Kinnaird; Steven Zhao; Kathryn E Wellen; Evangelos D Michelakis
Journal:  Nat Rev Cancer       Date:  2016-09-16       Impact factor: 60.716

7.  Multicellular Tumor Spheroids Combined with Mass Spectrometric Histone Analysis To Evaluate Epigenetic Drugs.

Authors:  Peter E Feist; Simone Sidoli; Xin Liu; Monica M Schroll; Sharif Rahmy; Rina Fujiwara; Benjamin A Garcia; Amanda B Hummon
Journal:  Anal Chem       Date:  2017-02-21       Impact factor: 6.986

Review 8.  Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.

Authors:  Haopeng Xiao; Fangxu Sun; Suttipong Suttapitugsakul; Ronghu Wu
Journal:  Mass Spectrom Rev       Date:  2019-01-03       Impact factor: 10.946

Review 9.  Metabolic and Epigenetic Coordination of T Cell and Macrophage Immunity.

Authors:  Anthony T Phan; Ananda W Goldrath; Christopher K Glass
Journal:  Immunity       Date:  2017-05-16       Impact factor: 31.745

10.  Proteomic approaches for cancer epigenetics research.

Authors:  Dylan M Marchione; Benjamin A Garcia; John Wojcik
Journal:  Expert Rev Proteomics       Date:  2018-11-27       Impact factor: 3.940

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