Literature DB >> 20222824

Nanomaterials based on DNA.

Nadrian C Seeman1.   

Abstract

The combination of synthetic stable branched DNA and sticky-ended cohesion has led to the development of structural DNA nanotechnology over the past 30 years. The basis of this enterprise is that it is possible to construct novel DNA-based materials by combining these features in a self-assembly protocol. Thus, simple branched molecules lead directly to the construction of polyhedrons, whose edges consist of double helical DNA and whose vertices correspond to the branch points. Stiffer branched motifs can be used to produce self-assembled two-dimensional and three-dimensional periodic lattices of DNA (crystals). DNA has also been used to make a variety of nanomechanical devices, including molecules that change their shapes and molecules that can walk along a DNA sidewalk. Devices have been incorporated into two-dimensional DNA arrangements; sequence-dependent devices are driven by increases in nucleotide pairing at each step in their machine cycles.

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Year:  2010        PMID: 20222824      PMCID: PMC3454582          DOI: 10.1146/annurev-biochem-060308-102244

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  79 in total

1.  Pseudohexagonal 2D DNA crystals from double crossover cohesion.

Authors:  Baoquan Ding; Ruojie Sha; Nadrian C Seeman
Journal:  J Am Chem Soc       Date:  2004-08-25       Impact factor: 15.419

2.  Thermodynamics of DNA branching.

Authors:  M Lu; Q Guo; L A Marky; N C Seeman; N R Kallenbach
Journal:  J Mol Biol       Date:  1992-02-05       Impact factor: 5.469

3.  Rapid chiral assembly of rigid DNA building blocks for molecular nanofabrication.

Authors:  R P Goodman; I A T Schaap; C F Tardin; C M Erben; R M Berry; C F Schmidt; A J Turberfield
Journal:  Science       Date:  2005-12-09       Impact factor: 47.728

4.  Two computational primitives for algorithmic self-assembly: copying and counting.

Authors:  Robert D Barish; Paul W K Rothemund; Erik Winfree
Journal:  Nano Lett       Date:  2005-12       Impact factor: 11.189

5.  Folding DNA to create nanoscale shapes and patterns.

Authors:  Paul W K Rothemund
Journal:  Nature       Date:  2006-03-16       Impact factor: 49.962

6.  DNA-guided crystallization of colloidal nanoparticles.

Authors:  Dmytro Nykypanchuk; Mathew M Maye; Daniel van der Lelie; Oleg Gang
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

7.  A platinum supramolecular square as an effective G-quadruplex binder and telomerase inhibitor.

Authors:  Roxanne Kieltyka; Pablo Englebienne; Johans Fakhoury; Chantal Autexier; Nicolas Moitessier; Hanadi F Sleiman
Journal:  J Am Chem Soc       Date:  2008-07-11       Impact factor: 15.419

Review 8.  Construction of three-dimensional stick figures from branched DNA.

Authors:  N C Seeman
Journal:  DNA Cell Biol       Date:  1991-09       Impact factor: 3.311

9.  Folding DNA origami from a double-stranded source of scaffold.

Authors:  Björn Högberg; Tim Liedl; William M Shih
Journal:  J Am Chem Soc       Date:  2009-07-08       Impact factor: 15.419

10.  Construction of biologically functional bacterial plasmids in vitro.

Authors:  S N Cohen; A C Chang; H W Boyer; R B Helling
Journal:  Proc Natl Acad Sci U S A       Date:  1973-11       Impact factor: 11.205

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  208 in total

1.  Complex shapes self-assembled from single-stranded DNA tiles.

Authors:  Bryan Wei; Mingjie Dai; Peng Yin
Journal:  Nature       Date:  2012-05-30       Impact factor: 49.962

2.  Liquid crystal self-assembly of random-sequence DNA oligomers.

Authors:  Tommaso Bellini; Giuliano Zanchetta; Tommaso P Fraccia; Roberto Cerbino; Ethan Tsai; Gregory P Smith; Mark J Moran; David M Walba; Noel A Clark
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-10       Impact factor: 11.205

Review 3.  Beyond DNA origami: the unfolding prospects of nucleic acid nanotechnology.

Authors:  Nicole Michelotti; Alexander Johnson-Buck; Anthony J Manzo; Nils G Walter
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2011-11-30

4.  Expanding the rule set of DNA circuitry with associative toehold activation.

Authors:  Xi Chen
Journal:  J Am Chem Soc       Date:  2011-12-14       Impact factor: 15.419

5.  Robust self-replication of combinatorial information via crystal growth and scission.

Authors:  Rebecca Schulman; Bernard Yurke; Erik Winfree
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-09       Impact factor: 11.205

6.  DNA-based self-assembly of chiral plasmonic nanostructures with tailored optical response.

Authors:  Anton Kuzyk; Robert Schreiber; Zhiyuan Fan; Günther Pardatscher; Eva-Maria Roller; Alexander Högele; Friedrich C Simmel; Alexander O Govorov; Tim Liedl
Journal:  Nature       Date:  2012-03-14       Impact factor: 49.962

7.  Cell-free protein synthesis and assembly on a biochip.

Authors:  Yael Heyman; Amnon Buxboim; Sharon G Wolf; Shirley S Daube; Roy H Bar-Ziv
Journal:  Nat Nanotechnol       Date:  2012-05-27       Impact factor: 39.213

8.  Nanoparticle assembly: made to order.

Authors:  Sharon C Glotzer; Joshua A Anderson
Journal:  Nat Mater       Date:  2010-11       Impact factor: 43.841

9.  Interconnecting gold islands with DNA origami nanotubes.

Authors:  Baoquan Ding; Hao Wu; Wei Xu; Zhao Zhao; Yan Liu; Hongbin Yu; Hao Yan
Journal:  Nano Lett       Date:  2010-11-11       Impact factor: 11.189

10.  Structural insights into DNA replication without hydrogen bonds.

Authors:  Karin Betz; Denis A Malyshev; Thomas Lavergne; Wolfram Welte; Kay Diederichs; Floyd E Romesberg; Andreas Marx
Journal:  J Am Chem Soc       Date:  2013-11-27       Impact factor: 15.419

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