Literature DB >> 20217576

PCR/LDR/universal array platforms for the diagnosis of infectious disease.

Maneesh Pingle1, Mark Rundell, Sanchita Das, Linnie M Golightly, Francis Barany.   

Abstract

Infectious diseases account for between 14 and 17 million deaths worldwide each year. Accurate and rapid diagnosis of bacterial, fungal, viral, and parasitic infections is therefore essential to reduce the morbidity and mortality associated with these diseases. Classical microbiological and serological methods have long served as the gold standard for diagnosis but are increasingly being replaced by molecular diagnostic methods that demonstrate increased sensitivity and specificity and provide an identification of the etiologic agent in a shorter period of time. PCR/LDR coupled with universal array detection provides a highly sensitive and specific platform for the detection and identification of bacterial and viral infections.

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Year:  2010        PMID: 20217576      PMCID: PMC4381875          DOI: 10.1007/978-1-60761-663-4_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  24 in total

1.  Universal DNA array detection of small insertions and deletions in BRCA1 and BRCA2.

Authors:  R Favis; J P Day; N P Gerry; C Phelan; S Narod; F Barany
Journal:  Nat Biotechnol       Date:  2000-05       Impact factor: 54.908

Review 2.  Mutation detection in K-ras, BRCA1, BRCA2, and p53 using PCR/LDR and a universal DNA microarray.

Authors:  R Favis; F Barany
Journal:  Ann N Y Acad Sci       Date:  2000-04       Impact factor: 5.691

Review 3.  Toward rapid real-time molecular diagnostic to guide smart use of antimicrobials.

Authors:  Maurice Boissinot; Michel G Bergeron
Journal:  Curr Opin Microbiol       Date:  2002-10       Impact factor: 7.934

4.  Multiplexed identification of blood-borne bacterial pathogens by use of a novel 16S rRNA gene PCR-ligase detection reaction-capillary electrophoresis assay.

Authors:  Maneesh R Pingle; Kathleen Granger; Philip Feinberg; Rebecca Shatsky; Bram Sterling; Mark Rundell; Eric Spitzer; Davise Larone; Linnie Golightly; Francis Barany
Journal:  J Clin Microbiol       Date:  2007-04-11       Impact factor: 5.948

Review 5.  The ligase chain reaction in a PCR world.

Authors:  F Barany
Journal:  PCR Methods Appl       Date:  1991-08

6.  Detecting colorectal cancer in stool with the use of multiple genetic targets.

Authors:  S M Dong; G Traverso; C Johnson; L Geng; R Favis; K Boynton; K Hibi; S N Goodman; M D'Allessio; P Paty; S R Hamilton; D Sidransky; F Barany; B Levin; A Shuber; K W Kinzler; B Vogelstein; J Jen
Journal:  J Natl Cancer Inst       Date:  2001-06-06       Impact factor: 13.506

7.  Development of a universal microarray based on the ligation detection reaction and 16S rrna gene polymorphism to target diversity of cyanobacteria.

Authors:  Bianca Castiglioni; Ermanno Rizzi; Andrea Frosini; Kaarina Sivonen; Pirjo Rajaniemi; Anne Rantala; Maria Angela Mugnai; Stefano Ventura; Annick Wilmotte; Christophe Boutte; Stana Grubisic; Pierre Balthasart; Clarissa Consolandi; Roberta Bordoni; Alessandra Mezzelani; Cristina Battaglia; Gianluca De Bellis
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

8.  Rapid and sensitive p53 alteration analysis in biopsies from lung cancer patients using a functional assay and a universal oligonucleotide array: a prospective study.

Authors:  Coralie Fouquet; Martine Antoine; Pascaline Tisserand; Reyna Favis; Marie Wislez; Fréderic Commo; Nathalie Rabbe; Marie France Carette; Bernard Milleron; Francis Barany; Jacques Cadranel; Gérard Zalcman; Thierry Soussi
Journal:  Clin Cancer Res       Date:  2004-05-15       Impact factor: 12.531

Review 9.  Molecular approaches to diagnosing and managing infectious diseases: practicality and costs.

Authors:  M A Pfaller
Journal:  Emerg Infect Dis       Date:  2001 Mar-Apr       Impact factor: 6.883

10.  Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction).

Authors:  Elena Busti; Roberta Bordoni; Bianca Castiglioni; Paolo Monciardini; Margherita Sosio; Stefano Donadio; Clarissa Consolandi; Luigi Rossi Bernardi; Cristina Battaglia; Gianluca De Bellis
Journal:  BMC Microbiol       Date:  2002-09-20       Impact factor: 3.605

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  4 in total

1.  Fully integrated thermoplastic genosensor for the highly sensitive detection and identification of multi-drug-resistant tuberculosis.

Authors:  Hong Wang; Hui-Wen Chen; Mateusz L Hupert; Pin-Chuan Chen; Proyag Datta; Tana L Pittman; Jost Goettert; Michael C Murphy; Diana Williams; Francis Barany; Steven A Soper
Journal:  Angew Chem Int Ed Engl       Date:  2012-03-19       Impact factor: 15.336

Review 2.  Molecular Profiling of Liquid Biopsy Samples for Precision Medicine.

Authors:  Camila D M Campos; Joshua M Jackson; Małgorzata A Witek; Steven A Soper
Journal:  Cancer J       Date:  2018 Mar/Apr       Impact factor: 3.360

3.  Invasive fungal infection of the central nervous system in a patient with acute myeloid leukaemia.

Authors:  Anna Janik-Moszant; Aleksander Matyl; Iwona Rurańska; Agnieszka Machowska-Majchrzak; Ewa Kluczewska; Tomasz Szczepański
Journal:  Pol J Radiol       Date:  2012-01

4.  A Multiplex PCR/LDR Assay for the Simultaneous Identification of Category A Infectious Pathogens: Agents of Viral Hemorrhagic Fever and Variola Virus.

Authors:  Sanchita Das; Mark S Rundell; Aashiq H Mirza; Maneesh R Pingle; Kristi Shigyo; Aura R Garrison; Jason Paragas; Scott K Smith; Victoria A Olson; Davise H Larone; Eric D Spitzer; Francis Barany; Linnie M Golightly
Journal:  PLoS One       Date:  2015-09-18       Impact factor: 3.240

  4 in total

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