Literature DB >> 29601336

Molecular Profiling of Liquid Biopsy Samples for Precision Medicine.

Camila D M Campos, Joshua M Jackson, Małgorzata A Witek, Steven A Soper.   

Abstract

In the context of oncology, liquid biopsies consist of harvesting cancer biomarkers, such as circulating tumor cells, tumor-derived cell-free DNA, and extracellular vesicles, from bodily fluids. These biomarkers provide a source of clinically actionable molecular information that can enable precision medicine. Herein, we review technologies for the molecular profiling of liquid biopsy markers with special emphasis on the analysis of low abundant markers from mixed populations.

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Year:  2018        PMID: 29601336      PMCID: PMC5880307          DOI: 10.1097/PPO.0000000000000311

Source DB:  PubMed          Journal:  Cancer J        ISSN: 1528-9117            Impact factor:   3.360


  72 in total

1.  Importance of RNA isolation methods for analysis of exosomal RNA: evaluation of different methods.

Authors:  Maria Eldh; Jan Lötvall; Carina Malmhäll; Karin Ekström
Journal:  Mol Immunol       Date:  2012-04       Impact factor: 4.407

2.  [Not Available].

Authors:  P MANDEL; P METAIS
Journal:  C R Seances Soc Biol Fil       Date:  1948-02

Review 3.  Extracellular Vesicles in Cardiovascular Disease: Potential Applications in Diagnosis, Prognosis, and Epidemiology.

Authors:  Felix Jansen; Georg Nickenig; Nikos Werner
Journal:  Circ Res       Date:  2017-05-12       Impact factor: 17.367

4.  Detection of circulating tumor DNA in early- and late-stage human malignancies.

Authors:  Chetan Bettegowda; Mark Sausen; Rebecca J Leary; Isaac Kinde; Yuxuan Wang; Nishant Agrawal; Bjarne R Bartlett; Hao Wang; Brandon Luber; Rhoda M Alani; Emmanuel S Antonarakis; Nilofer S Azad; Alberto Bardelli; Henry Brem; John L Cameron; Clarence C Lee; Leslie A Fecher; Gary L Gallia; Peter Gibbs; Dung Le; Robert L Giuntoli; Michael Goggins; Michael D Hogarty; Matthias Holdhoff; Seung-Mo Hong; Yuchen Jiao; Hartmut H Juhl; Jenny J Kim; Giulia Siravegna; Daniel A Laheru; Calogero Lauricella; Michael Lim; Evan J Lipson; Suely Kazue Nagahashi Marie; George J Netto; Kelly S Oliner; Alessandro Olivi; Louise Olsson; Gregory J Riggins; Andrea Sartore-Bianchi; Kerstin Schmidt; le-Ming Shih; Sueli Mieko Oba-Shinjo; Salvatore Siena; Dan Theodorescu; Jeanne Tie; Timothy T Harkins; Silvio Veronese; Tian-Li Wang; Jon D Weingart; Christopher L Wolfgang; Laura D Wood; Dongmei Xing; Ralph H Hruban; Jian Wu; Peter J Allen; C Max Schmidt; Michael A Choti; Victor E Velculescu; Kenneth W Kinzler; Bert Vogelstein; Nickolas Papadopoulos; Luis A Diaz
Journal:  Sci Transl Med       Date:  2014-02-19       Impact factor: 17.956

5.  Going with the flow: from circulating tumor cells to DNA.

Authors:  Francois-Clement Bidard; Britta Weigelt; Jorge S Reis-Filho
Journal:  Sci Transl Med       Date:  2013-10-16       Impact factor: 17.956

6.  Differential stability of cell-free circulating microRNAs: implications for their utilization as biomarkers.

Authors:  Verena Köberle; Thomas Pleli; Christian Schmithals; Eduardo Augusto Alonso; Jörg Haupenthal; Halvard Bönig; Jan Peveling-Oberhag; Ricardo M Biondi; Stefan Zeuzem; Bernd Kronenberger; Oliver Waidmann; Albrecht Piiper
Journal:  PLoS One       Date:  2013-09-20       Impact factor: 3.240

7.  Whole-exome sequencing of circulating tumor cells provides a window into metastatic prostate cancer.

Authors:  Jens G Lohr; Viktor A Adalsteinsson; Kristian Cibulskis; Atish D Choudhury; Mara Rosenberg; Peter Cruz-Gordillo; Joshua M Francis; Cheng-Zhong Zhang; Alex K Shalek; Rahul Satija; John J Trombetta; Diana Lu; Naren Tallapragada; Narmin Tahirova; Sora Kim; Brendan Blumenstiel; Carrie Sougnez; Alarice Lowe; Bang Wong; Daniel Auclair; Eliezer M Van Allen; Mari Nakabayashi; Rosina T Lis; Gwo-Shu M Lee; Tiantian Li; Matthew S Chabot; Amy Ly; Mary-Ellen Taplin; Thomas E Clancy; Massimo Loda; Aviv Regev; Matthew Meyerson; William C Hahn; Philip W Kantoff; Todd R Golub; Gad Getz; Jesse S Boehm; J Christopher Love
Journal:  Nat Biotechnol       Date:  2014-04-20       Impact factor: 54.908

8.  Exosomal long noncoding RNA CRNDE-h as a novel serum-based biomarker for diagnosis and prognosis of colorectal cancer.

Authors:  Tong Liu; Xin Zhang; Shanyu Gao; Fangmiao Jing; Yongmei Yang; Lutao Du; Guixi Zheng; Peilong Li; Chen Li; Chuanxin Wang
Journal:  Oncotarget       Date:  2016-12-20

9.  Exosomal miR-126 as a circulating biomarker in non-small-cell lung cancer regulating cancer progression.

Authors:  Franco Grimolizzi; Federica Monaco; Francesca Leoni; Massimo Bracci; Sara Staffolani; Cristiana Bersaglieri; Simona Gaetani; Matteo Valentino; Monica Amati; Corrado Rubini; Franca Saccucci; Jiri Neuzil; Marco Tomasetti; Lory Santarelli
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

10.  Quantitative threefold allele-specific PCR (QuanTAS-PCR) for highly sensitive JAK2 V617F mutant allele detection.

Authors:  Giada V Zapparoli; Robert N Jorissen; Chelsee A Hewitt; Michelle McBean; David A Westerman; Alexander Dobrovic
Journal:  BMC Cancer       Date:  2013-04-24       Impact factor: 4.430

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  16 in total

1.  Multilayer microfluidic array for highly efficient sample loading and digital melt analysis of DNA methylation.

Authors:  Christine M O'Keefe; Daniel Giammanco; Sixuan Li; Thomas R Pisanic; Tza-Huei Jeff Wang
Journal:  Lab Chip       Date:  2019-01-29       Impact factor: 6.799

2.  Visible photorelease of liquid biopsy markers following microfluidic affinity-enrichment.

Authors:  Thilanga N Pahattuge; J Matt Jackson; Rane Digamber; Harshani Wijerathne; Virginia Brown; Malgorzata A Witek; Chamani Perera; Richard S Givens; Blake R Peterson; Steven A Soper
Journal:  Chem Commun (Camb)       Date:  2020-03-12       Impact factor: 6.222

Review 3.  Cell Separations and Sorting.

Authors:  Malgorzata A Witek; Ian M Freed; Steven A Soper
Journal:  Anal Chem       Date:  2019-12-20       Impact factor: 6.986

4.  Label-Free Identification of Single Mononucleotides by Nanoscale Electrophoresis.

Authors:  Junseo Choi; Zheng Jia; Ramin Riahipour; Collin J McKinney; Charuni A Amarasekara; Kumuditha M Weerakoon-Ratnayake; Steven A Soper; Sunggook Park
Journal:  Small       Date:  2021-09-23       Impact factor: 15.153

5.  Microfluidic-based solid phase extraction of cell free DNA.

Authors:  Camila D M Campos; Sachindra S T Gamage; Joshua M Jackson; Malgorzata A Witek; Daniel S Park; Michael C Murphy; Andrew K Godwin; Steven A Soper
Journal:  Lab Chip       Date:  2018-11-06       Impact factor: 6.799

Review 6.  Nanobodies for Medical Imaging: About Ready for Prime Time?

Authors:  Léa Berland; Lauren Kim; Omar Abousaway; Andrea Mines; Shruti Mishra; Louise Clark; Paul Hofman; Mohammad Rashidian
Journal:  Biomolecules       Date:  2021-04-26

7.  Intra-individual variation of circulating tumour DNA in lung cancer patients.

Authors:  Johanne A Hojbjerg; Anne T Madsen; Hjordis H Schmidt; Steffen F Sorensen; Magnus Stougaard; Peter Meldgaard; Boe S Sorensen
Journal:  Mol Oncol       Date:  2019-08-16       Impact factor: 6.603

8.  Precision oncology: lessons learned and challenges for the future.

Authors:  Hsih-Te Yang; Ronak H Shah; David Tegay; Kenan Onel
Journal:  Cancer Manag Res       Date:  2019-08-07       Impact factor: 3.989

9.  Liquid biopsy in central nervous system metastases: a RANO review and proposals for clinical applications.

Authors:  Adrienne Boire; Dieta Brandsma; Priscilla K Brastianos; Emilie Le Rhun; Manmeet Ahluwalia; Larry Junck; Michael Glantz; Morris D Groves; Eudocia Q Lee; Nancy Lin; Jeffrey Raizer; Roberta Rudà; Michael Weller; Martin J Van den Bent; Michael A Vogelbaum; Susan Chang; Patrick Y Wen; Riccardo Soffietti
Journal:  Neuro Oncol       Date:  2019-05-06       Impact factor: 12.300

10.  Feasibility of next-generation sequencing in clinical practice: results of a pilot study in the Department of Precision Medicine at the University of Campania 'Luigi Vanvitelli'.

Authors:  Vincenzo De Falco; Luca Poliero; Pietro Paolo Vitello; Davide Ciardiello; Pasquale Vitale; Nicoletta Zanaletti; Emilio Francesco Giunta; Marinella Terminiello; Vincenza Caputo; Francesca Carlino; Raimondo Di Liello; Anna Ventriglia; Vincenzo Famiglietti; Erika Martinelli; Floriana Morgillo; Michele Orditura; Ferdinando De Vita; Morena Fasano; Stefania Napolitano; Giulia Martini; Carminia Maria Della Corte; Renato Franco; Lucia Altucci; Fortunato Ciardiello; Teresa Troiani
Journal:  ESMO Open       Date:  2020-03
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