Literature DB >> 20207127

Visualization of DNA methylation and histone modifications in living cells.

Hiroshi Kimura1, Yoko Hayashi-Takanaka, Kazuo Yamagata.   

Abstract

DNA methylation and histone modifications play important roles in genome function, including epigenetic gene regulation. These modifications undergo drastic changes when nuclei are reprogrammed during development and differentiation. Recent studies have enabled the detection of the dynamics of modifications in living cultured cells and mouse preimplantation embryos. DNA methylation was visualized using the methyl-CpG-binding domain of the human MBD1 protein. The level and distribution of histone modifications can be monitored by two different methods. One approach uses fluorescence/Förster resonance energy transfer (FRET)-based sensors and another uses fluorescently labeled antigen binding fragments of specific antibodies. These visualization techniques will facilitate future studies on epigenetic regulation related to development, differentiation, and disease. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20207127     DOI: 10.1016/j.ceb.2010.02.004

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  11 in total

1.  Dissecting chromatin interactions in living cells from protein mobility maps.

Authors:  Fabian Erdel; Katharina Müller-Ott; Michael Baum; Malte Wachsmuth; Karsten Rippe
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

2.  Early development of cloned bovine embryos produced from oocytes enucleated by fluorescence metaphase II imaging using a conventional halogen-lamp microscope.

Authors:  Daisaku Iwamoto; Kazuo Yamagata; Masao Kishi; Yoko Hayashi-Takanaka; Hiroshi Kimura; Teruhiko Wakayama; Kazuhiro Saeki
Journal:  Cell Reprogram       Date:  2015-04       Impact factor: 1.987

3.  Regulation of RNA polymerase II activation by histone acetylation in single living cells.

Authors:  Timothy J Stasevich; Yoko Hayashi-Takanaka; Yuko Sato; Kazumitsu Maehara; Yasuyuki Ohkawa; Kumiko Sakata-Sogawa; Makio Tokunaga; Takahiro Nagase; Naohito Nozaki; James G McNally; Hiroshi Kimura
Journal:  Nature       Date:  2014-09-21       Impact factor: 49.962

Review 4.  Modeling of spatially-restricted intracellular signaling.

Authors:  Susana R Neves
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2011-07-15

Review 5.  Live cell imaging and systems biology.

Authors:  Myong-Hee Sung; James G McNally
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010-08-20

Review 6.  Imaging beyond the proteome.

Authors:  Pamela V Chang; Carolyn R Bertozzi
Journal:  Chem Commun (Camb)       Date:  2012-07-17       Impact factor: 6.222

7.  Tracking epigenetic histone modifications in single cells using Fab-based live endogenous modification labeling.

Authors:  Yoko Hayashi-Takanaka; Kazuo Yamagata; Teruhiko Wakayama; Timothy J Stasevich; Takashi Kainuma; Toshiki Tsurimoto; Makoto Tachibana; Yoichi Shinkai; Hitoshi Kurumizaka; Naohito Nozaki; Hiroshi Kimura
Journal:  Nucleic Acids Res       Date:  2011-05-16       Impact factor: 16.971

Review 8.  Visualizing posttranslational and epigenetic modifications of endogenous proteins in vivo.

Authors:  Hiroshi Kimura; Yoko Hayashi-Takanaka; Timothy J Stasevich; Yuko Sato
Journal:  Histochem Cell Biol       Date:  2015-07-03       Impact factor: 4.304

Review 9.  Chromatin states and nuclear organization in development--a view from the nuclear lamina.

Authors:  Anna Mattout; Daphne S Cabianca; Susan M Gasser
Journal:  Genome Biol       Date:  2015-08-25       Impact factor: 13.583

10.  Genetically encoded system to track histone modification in vivo.

Authors:  Yuko Sato; Masanori Mukai; Jun Ueda; Michiko Muraki; Timothy J Stasevich; Naoki Horikoshi; Tomoya Kujirai; Hiroaki Kita; Taisuke Kimura; Seiji Hira; Yasushi Okada; Yoko Hayashi-Takanaka; Chikashi Obuse; Hitoshi Kurumizaka; Atsuo Kawahara; Kazuo Yamagata; Naohito Nozaki; Hiroshi Kimura
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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