Literature DB >> 22801420

Imaging beyond the proteome.

Pamela V Chang1, Carolyn R Bertozzi.   

Abstract

Imaging technologies developed in the early 20th century achieved contrast solely by relying on macroscopic and morphological differences between the tissues of interest and the surrounding tissues. Since then, there has been a movement toward imaging at the cellular and molecular level in order to visualize biological processes. This rapidly growing field is known as molecular imaging. In the last decade, many methodologies for imaging proteins have emerged. However, most of these approaches cannot be extended to imaging beyond the proteome. Here, we highlight some of the recently developed technologies that enable imaging of non-proteinaceous molecules in the cell: lipids, signalling molecules, inorganic ions, glycans, nucleic acids, small-molecule metabolites, and protein post-translational modifications such as phosphorylation and methylation.

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Year:  2012        PMID: 22801420      PMCID: PMC3660043          DOI: 10.1039/c2cc31845h

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  291 in total

Review 1.  Chemoselective approaches to glycoprotein assembly.

Authors:  H C Hang; C R Bertozzi
Journal:  Acc Chem Res       Date:  2001-09       Impact factor: 22.384

2.  Click-mediated labeling of bacterial membranes through metabolic modification of the lipopolysaccharide inner core.

Authors:  Audrey Dumont; Annie Malleron; Monzer Awwad; Sam Dukan; Boris Vauzeilles
Journal:  Angew Chem Int Ed Engl       Date:  2012-02-09       Impact factor: 15.336

3.  Chemical probes for the rapid detection of Fatty-acylated proteins in Mammalian cells.

Authors:  Howard C Hang; Ernst-Jan Geutjes; Gijsbert Grotenbreg; Annette M Pollington; Marie Jose Bijlmakers; Hidde L Ploegh
Journal:  J Am Chem Soc       Date:  2007-02-17       Impact factor: 15.419

Review 4.  Synthetic fluorescent sensors for studying the cell biology of metals.

Authors:  Dylan W Domaille; Emily L Que; Christopher J Chang
Journal:  Nat Chem Biol       Date:  2008-03       Impact factor: 15.040

5.  Biomedical applications of tetrazine cycloadditions.

Authors:  Neal K Devaraj; Ralph Weissleder
Journal:  Acc Chem Res       Date:  2011-05-31       Impact factor: 22.384

6.  Spatio-temporal dynamics of protein kinase B/Akt signaling revealed by a genetically encoded fluorescent reporter.

Authors:  Maya T Kunkel; Qiang Ni; Roger Y Tsien; Jin Zhang; Alexandra C Newton
Journal:  J Biol Chem       Date:  2004-12-06       Impact factor: 5.157

Review 7.  The chemical toolbox for monitoring protein fatty acylation and prenylation.

Authors:  Rami N Hannoush; Jinglucy Sun
Journal:  Nat Chem Biol       Date:  2010-07       Impact factor: 15.040

8.  Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(i)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides.

Authors:  Christian W Tornøe; Caspar Christensen; Morten Meldal
Journal:  J Org Chem       Date:  2002-05-03       Impact factor: 4.354

Review 9.  Metabolic glycoengineering: sialic acid and beyond.

Authors:  Jian Du; M Adam Meledeo; Zhiyun Wang; Hargun S Khanna; Venkata D P Paruchuri; Kevin J Yarema
Journal:  Glycobiology       Date:  2009-08-12       Impact factor: 4.313

10.  Intracellular sorting of galectin-8 based on carbohydrate fine specificity.

Authors:  Susanne Carlsson; Michael C Carlsson; Hakon Leffler
Journal:  Glycobiology       Date:  2007-06-22       Impact factor: 4.313

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  21 in total

Review 1.  Green and Red Fluorescent Dyes for Translational Applications in Imaging and Sensing Analytes: A Dual-Color Flag.

Authors:  Elisabete Oliveira; Emilia Bértolo; Cristina Núñez; Viviane Pilla; Hugo M Santos; Javier Fernández-Lodeiro; Adrian Fernández-Lodeiro; Jamila Djafari; José Luis Capelo; Carlos Lodeiro
Journal:  ChemistryOpen       Date:  2017-11-07       Impact factor: 2.911

Review 2.  A comprehensive review of glycosylated bacterial natural products.

Authors:  Sherif I Elshahawi; Khaled A Shaaban; Madan K Kharel; Jon S Thorson
Journal:  Chem Soc Rev       Date:  2015-11-07       Impact factor: 54.564

3.  Peptide Targeting of Fluorescein-Based Sensors to Discrete Intracellular Locales.

Authors:  Robert J Radford; Wen Chyan; Stephen J Lippard
Journal:  Chem Sci       Date:  2014-11       Impact factor: 9.825

4.  The versatility of N-alkyl-methoxyamine bi-functional linkers for the preparation of glycoconjugates.

Authors:  Stefan Munneke; Emma M Dangerfield; Bridget L Stocker; Mattie S M Timmer
Journal:  Glycoconj J       Date:  2017-07-19       Impact factor: 2.916

Review 5.  Exterior design: strategies for redecorating the bacterial surface with small molecules.

Authors:  Samir Gautam; Thomas J Gniadek; Taehan Kim; David A Spiegel
Journal:  Trends Biotechnol       Date:  2013-03-13       Impact factor: 19.536

6.  Strategy for dual-analyte luciferin imaging: in vivo bioluminescence detection of hydrogen peroxide and caspase activity in a murine model of acute inflammation.

Authors:  Genevieve C Van de Bittner; Carolyn R Bertozzi; Christopher J Chang
Journal:  J Am Chem Soc       Date:  2013-01-25       Impact factor: 15.419

7.  Peptide-based Targeting of Fluorescent Zinc Sensors to the Plasma Membrane of Live Cells.

Authors:  Robert J Radford; Wen Chyan; Stephen J Lippard
Journal:  Chem Sci       Date:  2013-08-01       Impact factor: 9.825

8.  Tracking the subcellular fate of 20(s)-hydroxycholesterol with click chemistry reveals a transport pathway to the Golgi.

Authors:  Sara M Peyrot; Sigrid Nachtergaele; Giovanni Luchetti; Laurel K Mydock-McGrane; Hideji Fujiwara; David Scherrer; Andrew Jallouk; Paul H Schlesinger; Daniel S Ory; Douglas F Covey; Rajat Rohatgi
Journal:  J Biol Chem       Date:  2014-03-04       Impact factor: 5.157

Review 9.  Progress and prospects for small-molecule probes of bacterial imaging.

Authors:  Ozden Kocaoglu; Erin E Carlson
Journal:  Nat Chem Biol       Date:  2016-06-17       Impact factor: 15.040

10.  Systemic Fluorescence Imaging of Zebrafish Glycans with Bioorthogonal Chemistry.

Authors:  Paresh Agarwal; Brendan J Beahm; Peyton Shieh; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2015-07-31       Impact factor: 15.336

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