Literature DB >> 20201523

Freezing of dynamics of a methyl group in a protein hydrophobic core at cryogenic temperatures by deuteron NMR spectroscopy.

Liliya Vugmeyster1, Dmitry Ostrovsky, Joseph J Ford, Andrew S Lipton.   

Abstract

Methyl groups are thought to dominate the dynamics of proteins after slow collective modes of motion freeze out in a glass-transition process. In this work we investigate methyl group dynamics of a key hydrophobic core leucine residue in chicken villin headpiece subdomain protein at 140-4 K using deuteron NMR longitudinal relaxation measurements. A distinct increase in the apparent activation energy is observed at approximately 95 K, indicating an abrupt freezing of methyl group dynamics. Relaxation times at temperatures below 60 K are dominated by the deuteron tunneling mechanism.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20201523     DOI: 10.1021/ja909599k

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

1.  Role of methyl groups in dynamics and evolution of biomolecules.

Authors:  Jonathan D Nickels; Joseph E Curtis; Hugh O'Neill; Alexei P Sokolov
Journal:  J Biol Phys       Date:  2012-04-14       Impact factor: 1.365

2.  Effect of subdomain interactions on methyl group dynamics in the hydrophobic core of villin headpiece protein.

Authors:  Liliya Vugmeyster; Tien Do; Dmitry Ostrovsky; Riqianq Fu
Journal:  Protein Sci       Date:  2013-12-03       Impact factor: 6.725

3.  Cryogenic temperature effects and resolution upon slow cooling of protein preparations in solid state NMR.

Authors:  Arne H Linden; W Trent Franks; Ümit Akbey; Sascha Lange; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2011-08-09       Impact factor: 2.835

Review 4.  Static solid-state 2H NMR methods in studies of protein side-chain dynamics.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-03-14       Impact factor: 9.795

5.  Aromatic Ring Dynamics, Thermal Activation, and Transient Conformations of a 468 kDa Enzyme by Specific 1H-13C Labeling and Fast Magic-Angle Spinning NMR.

Authors:  Diego F Gauto; Pavel Macek; Alessandro Barducci; Hugo Fraga; Audrey Hessel; Tsutomu Terauchi; David Gajan; Yohei Miyanoiri; Jerome Boisbouvier; Roman Lichtenecker; Masatsune Kainosho; Paul Schanda
Journal:  J Am Chem Soc       Date:  2019-07-05       Impact factor: 15.419

6.  77Se NMR Probes the Protein Environment of Selenomethionine.

Authors:  Qingqing Chen; Shiping Xu; Xingyu Lu; Michael V Boeri; Yuliya Pepelyayeva; Elizabeth L Diaz; Sunil-Datta Soni; Marc Allaire; Martin B Forstner; Brian J Bahnson; Sharon Rozovsky
Journal:  J Phys Chem B       Date:  2020-01-07       Impact factor: 2.991

7.  Chiral Supraparticles for Controllable Nanomedicine.

Authors:  Jihyeon Yeom; Pedro P G Guimaraes; Hyo Min Ahn; Bo-Kyeong Jung; Quanyin Hu; Kevin McHugh; Michael J Mitchell; Chae-Ok Yun; Robert Langer; Ana Jaklenec
Journal:  Adv Mater       Date:  2019-11-05       Impact factor: 30.849

8.  Slow motions in the hydrophobic core of chicken villin headpiece subdomain and their contributions to configurational entropy and heat capacity from solid-state deuteron NMR measurements.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Anastasia Khadjinova; Jeremy Ellden; Gina L Hoatson; Robert L Vold
Journal:  Biochemistry       Date:  2011-11-18       Impact factor: 3.162

9.  Solid state deuterium NMR study of LKα14 peptide aggregation in biosilica.

Authors:  Helen E Ferreira; Gary P Drobny
Journal:  Biointerphases       Date:  2017-06-27       Impact factor: 2.456

10.  (15)N CSA tensors and (15)N-(1)H dipolar couplings of protein hydrophobic core residues investigated by static solid-state NMR.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Riqiang Fu
Journal:  J Magn Reson       Date:  2015-09-03       Impact factor: 2.229

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.