Literature DB >> 20200492

Proteome diversification by adenosine to inosine RNA editing.

Dieter Pullirsch1, Michael F Jantsch.   

Abstract

Nucleotide deamination is a widespread phenomenon frequently leading to a change of the genetic information. Adenosine deaminases that act on RNA (ADARs) convert adenosines to inosines in double-stranded or structured regions of RNAs. Inosines are interpreted as guanosines by most cellular processes and hence, this type of modification can affect the coding potential of an RNA but also its splicing, folding or stability, to name a few. While originally believed to be a rare event recent bioinformatic screens have demonstrated that RNA editing by ADARs is widespread and very abundant in mammals. From these screens, editing sites were discovered in both coding and non-coding regions of mRNAs. In this review we focus on RNA editing events that alter the coding potential of mRNAs and hence lead to the formation of proteins that differ from their genomically encoded versions. We will therefore discuss the role of ADARs in proteome diversification, in particular in the nervous system where editing is most abundant.

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Year:  2010        PMID: 20200492     DOI: 10.4161/rna.7.2.11286

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  39 in total

1.  RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1.

Authors:  Jongchan Yeo; Rena A Goodman; Nicole T Schirle; Sheila S David; Peter A Beal
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-10       Impact factor: 11.205

Review 2.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

3.  Characterization and comparison of human nuclear and cytosolic editomes.

Authors:  Liang Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

Review 4.  Transcriptome complexity in cardiac development and diseases--an expanding universe between genome and phenome.

Authors:  Chen Gao; Yibin Wang
Journal:  Circ J       Date:  2014-04-22       Impact factor: 2.993

5.  Theory of the origin, evolution, and nature of life.

Authors:  Erik D Andrulis
Journal:  Life (Basel)       Date:  2011-12-23

Review 6.  ADAR proteins: double-stranded RNA and Z-DNA binding domains.

Authors:  Pierre Barraud; Frédéric H-T Allain
Journal:  Curr Top Microbiol Immunol       Date:  2012       Impact factor: 4.291

7.  A-to-I RNA editing is developmentally regulated and generally adaptive for sexual reproduction in Neurospora crassa.

Authors:  Huiquan Liu; Yang Li; Daipeng Chen; Zhaomei Qi; Qinhu Wang; Jianhua Wang; Cong Jiang; Jin-Rong Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-28       Impact factor: 11.205

Review 8.  Formation and processing of DNA damage substrates for the hNEIL enzymes.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  Free Radic Biol Med       Date:  2016-11-20       Impact factor: 7.376

9.  Dynamic regulation of RNA editing in human brain development and disease.

Authors:  Taeyoung Hwang; Chul-Kee Park; Anthony K L Leung; Yuan Gao; Thomas M Hyde; Joel E Kleinman; Anandita Rajpurohit; Ran Tao; Joo Heon Shin; Daniel R Weinberger
Journal:  Nat Neurosci       Date:  2016-06-27       Impact factor: 24.884

10.  RNA editing of protein sequences: a rare event in human transcriptomes.

Authors:  Claudia L Kleinman; Véronique Adoue; Jacek Majewski
Journal:  RNA       Date:  2012-07-25       Impact factor: 4.942

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