| Literature DB >> 20198160 |
L Lombard1, C A Rodas, P W Crous, B D Wingfield, M J Wingfield.
Abstract
Calonectria (Ca.) species and their Cylindrocladium (Cy.) anamorphs are well-known pathogens of forest nursery plants in subtropical and tropical areas of the world. An investigation of the mortality of rooted Pinus cuttings in a commercial forest nursery in Colombia led to the isolation of two Cylindrocladium anamorphs of Calonectria species. The aim of this study was to identify these species using DNA sequence data and morphological comparisons. Two species were identified, namely one undescribed species, and Cy. gracile, which is allocated to Calonectria as Ca. brassicae. The new species, Ca. brachiatica, resides in the Ca. brassicae species complex. Pathogenicity tests with Ca. brachiatica and Ca. brassicae showed that both are able to cause disease on Pinus maximinoi and P. tecunumanii. An emended key is provided to distinguish between Calonectria species with clavate vesicles and 1-septate macroconidia.Entities:
Keywords: Calonectria; Cylindrocladium; Pinus; histone; root disease; β-tubulin
Year: 2009 PMID: 20198160 PMCID: PMC2802723 DOI: 10.3767/003158509X471052
Source DB: PubMed Journal: Persoonia ISSN: 0031-5850 Impact factor: 11.051
Fig. 1Collar and root rot on Pinus maximinoi and P. tecunumanii. a. Girdled stem of P. maximinoi; b. exposed P. maximinoi root collar showing discolouration and resin exudation; c, d. exposed P. tecunumanii root collars showing girdling and discolouration of the cambium.
Strains of Calonectria (Cylindrocladium) species included in the phylogenetic analyses (TreeBase SN 4332).
| Species | Isolate number | β-tubulin | Histone H3 | Host | Origin | Collector |
|---|---|---|---|---|---|---|
| CBS 313.92T | AF333392 | DQ190620 | USA | S.A. Alfieri | ||
| CMW 25293 | FJ716710 | FJ716714 | Colombia | M.J. Wingfield | ||
| CMW 25298 (= CBS 123700)T | FJ696388 | FJ696396 | Colombia | M.J. Wingfield | ||
| CMW 25302 | FJ716708 | FJ716712 | Colombia | M.J. Wingfield | ||
| CMW 25307 | FJ716709 | FJ716713 | Colombia | M.J. Wingfield | ||
| CBS 111869T | AF232857 | DQ190720 | South East Asia | |||
| CBS 111478 | DQ190611 | DQ190719 | Soil | Brazil | A.C. Alfenas | |
| CMW 25296 | FJ716707 | FJ716711 | Colombia | M.J. Wingfield | ||
| CMW 25297; CBS123702 | FJ696387 | FJ696395 | Colombia | M.J. Wingfield | ||
| CMW 25299; CBS123701 | FJ696390 | FJ696398 | Colombia | M.J. Wingfield | ||
| CBS 114557T | AF333396 | DQ190623 | USA | N.E. El-Gholl | ||
| CBS 114666T | DQ190549 | DQ190624 | USA | N.E. El-Gholl | ||
| CBS111776T | AF232850 | DQ190700 | Brazil | C.S. Hodges | ||
| CBS 12221 | AY725620 | AY725663 | Soil | Colombia | M.J. Wingfield | |
| CBS 111406T | DQ190600 | DQ190705 | Soil | Ecuador | M.J. Wingfield | |
| CBS 111141T | DQ190566 | DQ190644 | Colombia | M.J. Wingfield | ||
| CBS 115674 | AF333406 | DQ190645 | Soil | Colombia | M.J. Wingfield | |
| CBS 111284 | DQ190567 | DQ190647 | Brazil | P.W. Crous | ||
| CBS 111807T | AF232858 | DQ190646 | Brazil |
1 CBS: Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands; CMW: culture collection of the Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.
2 GenBank accession numbers.
T ex-type culture.
Fig. 2The most parsimonious tree obtained from a heuristic search with 1 000 random addition sequences of the combined β-tubulin and histone H3 sequence alignments. Scale bar shows 10 changes and bootstrap support values from 1 000 replicates are shown at the nodes. Bayesian posterior probabilities are indicated below the branches. Bold lines indicate branches present in the Bayesian consensus tree. The tree was rooted with Calonectria colombiensis (CBS 112221).
Fig. 3Histogram showing mean lesion lengths induced by each isolate on P. maximinoi (dark grey) and P. tecunumanii (light grey). Calonectria brassicae is represented by CMW 25296, CMW 25297 and CMW 25299; Ca. brachiatica is represented by CMW 25293, CMW 25302 and CMW 25307.
Fig. 4Calonectria brachiatica. a. Macroconidiophore with lateral branching stipe extensions; b, c. clavate vesicles; d. fertile branches; e. macroconidia. — Scale bars = 10 μm.
Fig. 5Calonectria brassicae. a. Macroconidiophore on SNA; b. macroconidia; c. fertile branches; d, e. clavate vesicles. — Scale bars = 10 μm.