Literature DB >> 20164194

Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase zeta and REV1.

Kodai Hara1, Hiroshi Hashimoto, Yoshiki Murakumo, Shunsuke Kobayashi, Toshiaki Kogame, Satoru Unzai, Satoko Akashi, Shunichi Takeda, Toshiyuki Shimizu, Mamoru Sato.   

Abstract

DNA polymerase zeta (Polzeta) is an error-prone DNA polymerase involved in translesion DNA synthesis. Polzeta consists of two subunits: the catalytic REV3, which belongs to B family DNA polymerase, and the noncatalytic REV7. REV7 also interacts with REV1 polymerase, which is an error-prone Y family DNA polymerase and is also involved in translesion DNA synthesis. Cells deficient in one of the three REV proteins and those deficient in all three proteins show similar phenotype, indicating the functional collaboration of the three REV proteins. REV7 interacts with both REV3 and REV1 polymerases, but the structure of REV7 or REV3, as well as the structural and functional basis of the REV1-REV7 and REV3-REV7 interactions, remains unknown. Here we show the first crystal structure of human REV7 in complex with a fragment of human REV3 polymerase (residues 1847-1898) and reveal the mechanism underlying REV7-REV3 interaction. The structure indicates that the interaction between REV7 and REV3 creates a structural interface for REV1 binding. Furthermore, we show that the REV7-mediated interactions are responsible for DNA damage tolerance. Our results highlight the function of REV7 as an adapter protein to recruit Polzeta to a lesion site. REV7 is alternatively called MAD2B or MAD2L2 and also involved in various cellular functions such as signal transduction and cell cycle regulation. Our results will provide a general structural basis for understanding the REV7 interaction.

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Year:  2010        PMID: 20164194      PMCID: PMC2852969          DOI: 10.1074/jbc.M109.092403

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  53 in total

1.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

2.  The human REV1 gene codes for a DNA template-dependent dCMP transferase.

Authors:  W Lin; H Xin; Y Zhang; X Wu; F Yuan; Z Wang
Journal:  Nucleic Acids Res       Date:  1999-11-15       Impact factor: 16.971

3.  Disruption of the Rev3l-encoded catalytic subunit of polymerase zeta in mice results in early embryonic lethality.

Authors:  G Esposito; I Godindagger; U Klein; M L Yaspo; A Cumano; K Rajewsky
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

4.  Disruption of the developmentally regulated Rev3l gene causes embryonic lethality.

Authors:  J Wittschieben; M K Shivji; E Lalani; M A Jacobs; F Marini; P J Gearhart; I Rosewell; G Stamp; R D Wood
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

5.  Disruption of mouse polymerase zeta (Rev3) leads to embryonic lethality and impairs blastocyst development in vitro.

Authors:  M Bemark; A A Khamlichi; S L Davies; M S Neuberger
Journal:  Curr Biol       Date:  2000-10-05       Impact factor: 10.834

6.  MAD2B is an inhibitor of the anaphase-promoting complex.

Authors:  J Chen; G Fang
Journal:  Genes Dev       Date:  2001-07-15       Impact factor: 11.361

7.  A human REV7 homolog that interacts with the polymerase zeta catalytic subunit hREV3 and the spindle assembly checkpoint protein hMAD2.

Authors:  Y Murakumo; T Roth; H Ishii; D Rasio; S Numata; C M Croce; R Fishel
Journal:  J Biol Chem       Date:  2000-02-11       Impact factor: 5.157

8.  Interactions in the error-prone postreplication repair proteins hREV1, hREV3, and hREV7.

Authors:  Y Murakumo; Y Ogura; H Ishii; S Numata; M Ichihara; C M Croce; R Fishel; M Takahashi
Journal:  J Biol Chem       Date:  2001-08-02       Impact factor: 5.157

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  Maximum-likelihood density modification.

Authors:  T C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-08
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  72 in total

1.  DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.

Authors:  Andrey G Baranovskiy; Artem G Lada; Hollie M Siebler; Yinbo Zhang; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

2.  Multifaceted recognition of vertebrate Rev1 by translesion polymerases ζ and κ.

Authors:  Jessica Wojtaszek; Jiangxin Liu; Sanjay D'Souza; Su Wang; Yaohua Xue; Graham C Walker; Pei Zhou
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

Review 3.  Regulation of DNA cross-link repair by the Fanconi anemia/BRCA pathway.

Authors:  Hyungjin Kim; Alan D D'Andrea
Journal:  Genes Dev       Date:  2012-07-01       Impact factor: 11.361

4.  The vital role of polymerase ζ and REV1 in mutagenic, but not correct, DNA synthesis across benzo[a]pyrene-dG and recruitment of polymerase ζ by REV1 to replication-stalled site.

Authors:  Keiji Hashimoto; Youngjin Cho; In-Young Yang; Jun-ichi Akagi; Eiji Ohashi; Satoshi Tateishi; Niels de Wind; Fumio Hanaoka; Haruo Ohmori; Masaaki Moriya
Journal:  J Biol Chem       Date:  2012-02-02       Impact factor: 5.157

5.  Structure of the Human Atg13-Atg101 HORMA Heterodimer: an Interaction Hub within the ULK1 Complex.

Authors:  Shiqian Qi; Do Jin Kim; Goran Stjepanovic; James H Hurley
Journal:  Structure       Date:  2015-08-20       Impact factor: 5.006

6.  The architecture of yeast DNA polymerase ζ.

Authors:  Yacob Gómez-Llorente; Radhika Malik; Rinku Jain; Jayati Roy Choudhury; Robert E Johnson; Louise Prakash; Satya Prakash; Iban Ubarretxena-Belandia; Aneel K Aggarwal
Journal:  Cell Rep       Date:  2013-10-10       Impact factor: 9.423

7.  Regulation of the Rev1-pol ζ complex during bypass of a DNA interstrand cross-link.

Authors:  Magda Budzowska; Thomas G W Graham; Alexandra Sobeck; Shou Waga; Johannes C Walter
Journal:  EMBO J       Date:  2015-06-12       Impact factor: 11.598

Review 8.  Shieldin - the protector of DNA ends.

Authors:  Dheva Setiaputra; Daniel Durocher
Journal:  EMBO Rep       Date:  2019-04-04       Impact factor: 8.807

Review 9.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

Review 10.  REV1 and DNA polymerase zeta in DNA interstrand crosslink repair.

Authors:  Shilpy Sharma; Christine E Canman
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

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