Literature DB >> 22303021

The vital role of polymerase ζ and REV1 in mutagenic, but not correct, DNA synthesis across benzo[a]pyrene-dG and recruitment of polymerase ζ by REV1 to replication-stalled site.

Keiji Hashimoto1, Youngjin Cho, In-Young Yang, Jun-ichi Akagi, Eiji Ohashi, Satoshi Tateishi, Niels de Wind, Fumio Hanaoka, Haruo Ohmori, Masaaki Moriya.   

Abstract

The DNA synthesis across DNA lesions, termed translesion synthesis (TLS), is a complex process influenced by various factors. To investigate this process in mammalian cells, we examined TLS across a benzo[a]pyrene dihydrodiol epoxide-derived dG adduct (BPDE-dG) using a plasmid bearing a single BPDE-dG and genetically engineered mouse embryonic fibroblasts (MEFs). In wild-type MEFs, TLS was extremely miscoding (>90%) with G → T transversions being predominant. Knockout of the Rev1 gene decreased both the TLS efficiency and the miscoding frequency. Knockout of the Rev3L gene, coding for the catalytic subunit of pol ζ, caused even greater decreases in these two TLS parameters; almost all residual TLS were error-free. Thus, REV1 and pol ζ are critical to mutagenic, but not accurate, TLS across BPDE-dG. The introduction of human REV1 cDNA into Rev1(-/-) MEFs restored the mutagenic TLS, but a REV1 mutant lacking the C terminus did not. Yeast and mammalian three-hybrid assays revealed that the REV7 subunit of pol ζ mediated the interaction between REV3 and the REV1 C terminus. These results support the hypothesis that REV1 recruits pol ζ through the interaction with REV7. Our results also predict the existence of a minor REV1-independent pol ζ recruitment pathway. Finally, although mutagenic TLS across BPDE-dG largely depends on RAD18, experiments using Polk(-/-) Polh(-/-) Poli(-/-) triple-gene knockout MEFs unexpectedly revealed that another polymerase(s) could insert a nucleotide opposite BPDE-dG. This indicates that a non-Y family polymerase(s) can insert a nucleotide opposite BPDE-dG, but the subsequent extension from miscoding termini depends on REV1-polζ in a RAD18-dependent manner.

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Year:  2012        PMID: 22303021      PMCID: PMC3308759          DOI: 10.1074/jbc.M111.331728

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  48 in total

1.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

2.  Evidence for a second function for Saccharomyces cerevisiae Rev1p.

Authors:  J R Nelson; P E Gibbs; A M Nowicka; D C Hinkle; C W Lawrence
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

3.  Human replicative DNA polymerase δ can bypass T-T (6-4) ultraviolet photoproducts on template strands.

Authors:  Takeo Narita; Toshiki Tsurimoto; Junpei Yamamoto; Kana Nishihara; Kaori Ogawa; Eiji Ohashi; Terry Evans; Shigenori Iwai; Shunichi Takeda; Kouji Hirota
Journal:  Genes Cells       Date:  2010-11-11       Impact factor: 1.891

4.  The Rev1 translesion synthesis polymerase has multiple distinct DNA binding modes.

Authors:  Frederik H de Groote; Jacob G Jansen; Yuji Masuda; Dipen M Shah; Kenji Kamiya; Niels de Wind; Gregg Siegal
Journal:  DNA Repair (Amst)       Date:  2011-07-12

5.  The DNA polymerase activity of Saccharomyces cerevisiae Rev1 is biologically significant.

Authors:  Mary Ellen Wiltrout; Graham C Walker
Journal:  Genetics       Date:  2010-10-26       Impact factor: 4.562

6.  The non-canonical protein binding site at the monomer-monomer interface of yeast proliferating cell nuclear antigen (PCNA) regulates the Rev1-PCNA interaction and Polζ/Rev1-dependent translesion DNA synthesis.

Authors:  Neeru M Sharma; Olga V Kochenova; Polina V Shcherbakova
Journal:  J Biol Chem       Date:  2011-07-28       Impact factor: 5.157

Review 7.  DNA polymerases and cancer.

Authors:  Sabine S Lange; Kei-ichi Takata; Richard D Wood
Journal:  Nat Rev Cancer       Date:  2011-02       Impact factor: 60.716

Review 8.  Separate roles of structured and unstructured regions of Y-family DNA polymerases.

Authors:  Haruo Ohmori; Tomo Hanafusa; Eiji Ohashi; Cyrus Vaziri
Journal:  Adv Protein Chem Struct Biol       Date:  2009-11-27       Impact factor: 3.507

9.  Structure and mechanism of human DNA polymerase eta.

Authors:  Christian Biertümpfel; Ye Zhao; Yuji Kondo; Santiago Ramón-Maiques; Mark Gregory; Jae Young Lee; Chikahide Masutani; Alan R Lehmann; Fumio Hanaoka; Wei Yang
Journal:  Nature       Date:  2010-06-24       Impact factor: 49.962

10.  Sequential assembly of translesion DNA polymerases at UV-induced DNA damage sites.

Authors:  Parker L Andersen; Fang Xu; Barry Ziola; W Glen McGregor; Wei Xiao
Journal:  Mol Biol Cell       Date:  2011-05-05       Impact factor: 4.138

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  24 in total

1.  Mutagenic Replication of N2-Deoxyguanosine Benzo[a]pyrene Adducts by Escherichia coli DNA Polymerase I and Sulfolobus solfataricus DNA Polymerase IV.

Authors:  A S Prakasha Gowda; Jacek Krzeminski; Shantu Amin; Zucai Suo; Thomas E Spratt
Journal:  Chem Res Toxicol       Date:  2017-04-19       Impact factor: 3.739

2.  A Small Molecule Targeting Mutagenic Translesion Synthesis Improves Chemotherapy.

Authors:  Jessica L Wojtaszek; Nimrat Chatterjee; Javaria Najeeb; Azucena Ramos; Minhee Lee; Ke Bian; Jenny Y Xue; Benjamin A Fenton; Hyeri Park; Deyu Li; Michael T Hemann; Jiyong Hong; Graham C Walker; Pei Zhou
Journal:  Cell       Date:  2019-06-06       Impact factor: 41.582

3.  REV7 is required for anaphase-promoting complex-dependent ubiquitination and degradation of translesion DNA polymerase REV1.

Authors:  Abel Chiu-Shun Chun; Kin-Hang Kok; Dong-Yan Jin
Journal:  Cell Cycle       Date:  2012-01-15       Impact factor: 4.534

4.  Y-family DNA polymerase-independent gap-filling translesion synthesis across aristolochic acid-derived adenine adducts in mouse cells.

Authors:  Keiji Hashimoto; Radha Bonala; Francis Johnson; Arthur P Grollman; Masaaki Moriya
Journal:  DNA Repair (Amst)       Date:  2016-07-29

5.  Human Pol ζ purified with accessory subunits is active in translesion DNA synthesis and complements Pol η in cisplatin bypass.

Authors:  Young-Sam Lee; Mark T Gregory; Wei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

Review 6.  Eukaryotic DNA Polymerases in Homologous Recombination.

Authors:  Mitch McVey; Varandt Y Khodaverdian; Damon Meyer; Paula Gonçalves Cerqueira; Wolf-Dietrich Heyer
Journal:  Annu Rev Genet       Date:  2016-11-23       Impact factor: 16.830

7.  Genomic and functional integrity of the hematopoietic system requires tolerance of oxidative DNA lesions.

Authors:  Ana Martín-Pardillos; Anastasia Tsaalbi-Shtylik; Si Chen; Seka Lazare; Ronald P van Os; Albertina Dethmers-Ausema; Nima Borhan Fakouri; Matthias Bosshard; Rossana Aprigliano; Barbara van Loon; Daniela C F Salvatori; Keiji Hashimoto; Celia Dingemanse-van der Spek; Masaaki Moriya; Lene Juel Rasmussen; Gerald de Haan; Marc H G P Raaijmakers; Niels de Wind
Journal:  Blood       Date:  2017-08-21       Impact factor: 22.113

8.  Within-Host Variations of Human Papillomavirus Reveal APOBEC Signature Mutagenesis in the Viral Genome.

Authors:  Yusuke Hirose; Mamiko Onuki; Yuri Tenjimbayashi; Seiichiro Mori; Yoshiyuki Ishii; Takamasa Takeuchi; Nobutaka Tasaka; Toyomi Satoh; Tohru Morisada; Takashi Iwata; Shingo Miyamoto; Koji Matsumoto; Akihiko Sekizawa; Iwao Kukimoto
Journal:  J Virol       Date:  2018-05-29       Impact factor: 5.103

9.  The C-terminal domain of human Rev1 contains independent binding sites for DNA polymerase η and Rev7 subunit of polymerase ζ.

Authors:  Yulia Pustovalova; Irina Bezsonova; Dmitry M Korzhnev
Journal:  FEBS Lett       Date:  2012-07-22       Impact factor: 4.124

10.  Identification of the first small-molecule inhibitor of the REV7 DNA repair protein interaction.

Authors:  Marcelo L Actis; Nigus D Ambaye; Benjamin J Evison; Youming Shao; Murugendra Vanarotti; Akira Inoue; Ezelle T McDonald; Sotaro Kikuchi; Richard Heath; Kodai Hara; Hiroshi Hashimoto; Naoaki Fujii
Journal:  Bioorg Med Chem       Date:  2016-07-16       Impact factor: 3.641

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