Literature DB >> 20149718

Use of two-component signal transduction systems in the construction of synthetic genetic networks.

Alexander J Ninfa1.   

Abstract

Two-component signal transduction systems are a common type of signaling system in prokaryotes; the typical cell has dozens of systems regulating aspects of physiology and controlling responses to environmental conditions. In this review, I consider how these systems may be useful for engineering novel cell functions. Examples of successful incorporation of two-component systems into engineered systems are noted, and features of the systems that favor or hinder potential future use of these signaling systems for synthetic biology applications are discussed. The focus will be on the engineering of novel couplings of sensory functions to signaling outputs. Recent successes in this area are noted, such as the development of light-sensitive transmitter proteins and chemotactic receptors responsive to nitrate. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20149718      PMCID: PMC3547608          DOI: 10.1016/j.mib.2010.01.003

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  58 in total

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2.  Genetic and biochemical studies of phosphatase activity of PhoR.

Authors:  Daniel O Carmany; Kristine Hollingsworth; William R McCleary
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Review 3.  Reconstruction of genetic circuits.

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Review 4.  Stimulus perception in bacterial signal-transducing histidine kinases.

Authors:  Thorsten Mascher; John D Helmann; Gottfried Unden
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

Review 5.  Specificity in two-component signal transduction pathways.

Authors:  Michael T Laub; Mark Goulian
Journal:  Annu Rev Genet       Date:  2007       Impact factor: 16.830

6.  A synthetic genetic edge detection program.

Authors:  Jeffrey J Tabor; Howard M Salis; Zachary Booth Simpson; Aaron A Chevalier; Anselm Levskaya; Edward M Marcotte; Christopher A Voigt; Andrew D Ellington
Journal:  Cell       Date:  2009-06-26       Impact factor: 41.582

7.  Mutations that alter the kinase and phosphatase activities of the two-component sensor EnvZ.

Authors:  W Hsing; F D Russo; K K Bernd; T J Silhavy
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

8.  A novel histidine kinase inhibitor regulating development in Bacillus subtilis.

Authors:  L Wang; R Grau; M Perego; J A Hoch
Journal:  Genes Dev       Date:  1997-10-01       Impact factor: 11.361

9.  Crosstalk between bacterial chemotaxis signal transduction proteins and regulators of transcription of the Ntr regulon: evidence that nitrogen assimilation and chemotaxis are controlled by a common phosphotransfer mechanism.

Authors:  A J Ninfa; E G Ninfa; A N Lupas; A Stock; B Magasanik; J Stock
Journal:  Proc Natl Acad Sci U S A       Date:  1988-08       Impact factor: 11.205

10.  A fast, robust and tunable synthetic gene oscillator.

Authors:  Jesse Stricker; Scott Cookson; Matthew R Bennett; William H Mather; Lev S Tsimring; Jeff Hasty
Journal:  Nature       Date:  2008-10-29       Impact factor: 49.962

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  14 in total

Review 1.  Foundations for the design and implementation of synthetic genetic circuits.

Authors:  Adrian L Slusarczyk; Allen Lin; Ron Weiss
Journal:  Nat Rev Genet       Date:  2012-05-18       Impact factor: 53.242

2.  Modulation of Response Regulator CheY Reaction Kinetics by Two Variable Residues That Affect Conformation.

Authors:  Philip B Straughn; Luke R Vass; Chase Yuan; Emily N Kennedy; Clay A Foster; Robert B Bourret
Journal:  J Bacteriol       Date:  2020-07-09       Impact factor: 3.490

Review 3.  Protein histidine kinases: assembly of active sites and their regulation in signaling pathways.

Authors:  Richard C Stewart
Journal:  Curr Opin Microbiol       Date:  2010-01-29       Impact factor: 7.934

Review 4.  Biofuel metabolic engineering with biosensors.

Authors:  Stacy-Anne Morgan; Dana C Nadler; Rayka Yokoo; David F Savage
Journal:  Curr Opin Chem Biol       Date:  2016-10-18       Impact factor: 8.822

5.  Identification and Characterization of the Two-Component System HK8700-RR8701 of Kocuria rhizophila DC2201.

Authors:  Baohua Chen; Tingting Zou; Long Zou; Haiyan Ni; Yunhong Huang; Zhong-Er Long
Journal:  Protein J       Date:  2019-12       Impact factor: 2.371

6.  An asymmetry-to-symmetry switch in signal transmission by the histidine kinase receptor for TMAO.

Authors:  Jason O Moore; Wayne A Hendrickson
Journal:  Structure       Date:  2012-04-03       Impact factor: 5.006

Review 7.  Synthetic biology approaches in drug discovery and pharmaceutical biotechnology.

Authors:  Heinz Neumann; Petra Neumann-Staubitz
Journal:  Appl Microbiol Biotechnol       Date:  2010-04-16       Impact factor: 4.813

8.  Genetic switches and related tools for controlling gene expression and electrical outputs of Geobacter sulfurreducens.

Authors:  Toshiyuki Ueki; Kelly P Nevin; Trevor L Woodard; Derek R Lovley
Journal:  J Ind Microbiol Biotechnol       Date:  2016-09-22       Impact factor: 3.346

Review 9.  Transcription factor-based biosensors enlightened by the analyte.

Authors:  Raul Fernandez-López; Raul Ruiz; Fernando de la Cruz; Gabriel Moncalián
Journal:  Front Microbiol       Date:  2015-07-01       Impact factor: 5.640

10.  Different evolutionary modifications as a guide to rewire two-component systems.

Authors:  Beate Krueger; Torben Friedrich; Frank Förster; Jörg Bernhardt; Roy Gross; Thomas Dandekar
Journal:  Bioinform Biol Insights       Date:  2012-05-03
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