Literature DB >> 31475523

Structural Origin of the Large Redox-Linked Reorganization in the 2-Oxoglutarate Dependent Oxygenase, TauD.

Christopher W John1, Robert P Hausinger2,3, Denis A Proshlyakov1.   

Abstract

2-Oxoglutarate (2OG)-dependent oxygenases catalyze a wide range of chemical transformations via C-H bond activation. Prior studies raised the question of whether substrate hydroxylation by these enzymes occurs via a hydroxyl rebound or alkoxide mechanism and highlighted the need to understand the thermodynamic properties of transient intermediates. A recent spectroelectrochemical investigation of the 2OG-dependent oxygenase, taurine hydroxylase (TauD), revealed a strong link between the redox potential of the Fe(II)/Fe(III) couple and conformational changes of the enzyme. In this study, we show that the redox potential of wild-type TauD varies by 468 mV between the reduction of 2OG-Fe(III)-TauD (-272 mV) and oxidation of 2OG-Fe(II)-TauD (+196 mV). We use active site variants to investigate the structural origin of the redox-linked reorganization and the contributions of the metal-bound residues to the dynamic tuning of the redox potential of TauD. Time-dependent redox titrations show that reorganization occurs as a multistep process. Transient optical absorption and infrared spectroelectrochemistry show that substitution of any metal ligand alters the kinetics and thermodynamics of the reorganization. The H99A variant shows the largest net redox change relative to the wild-type protein, suggesting that redox-coupled protonation of H99 is required for high redox potentials of the metal. The D101Q and H255Q variants also suppress the conformational change, supporting their involvement in the structural rearrangement. Similar redox-linked conformational changes are observed in another 2OG dependent oxygenase, ethylene-forming enzyme, indicating that dynamic structural flexibility and the associated thermodynamic tuning may be a common phenomenon in this family of enzymes.

Entities:  

Year:  2019        PMID: 31475523      PMCID: PMC7092798          DOI: 10.1021/jacs.9b07493

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

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Authors:  A Barth
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

2.  Redox-induced conformational changes in myoglobin and hemoglobin: electrochemistry and ultraviolet-visible and Fourier transform infrared difference spectroscopy at surface-modified gold electrodes in an ultra-thin-layer spectroelectrochemical cell.

Authors:  D D Schlereth; W Mäntele
Journal:  Biochemistry       Date:  1992-08-25       Impact factor: 3.162

3.  Probing structure-function relations in heme-containing oxygenases and peroxidases.

Authors:  J H Dawson
Journal:  Science       Date:  1988-04-22       Impact factor: 47.728

4.  O2- and alpha-ketoglutarate-dependent tyrosyl radical formation in TauD, an alpha-keto acid-dependent non-heme iron dioxygenase.

Authors:  Matthew J Ryle; Aimin Liu; Rajendra Bose Muthukumaran; Raymond Y N Ho; Kevin D Koehntop; John McCracken; Lawrence Que; Robert P Hausinger
Journal:  Biochemistry       Date:  2003-02-25       Impact factor: 3.162

5.  Fourier Transform Infrared Spectrovoltammetry and Quantitative Modeling of Analytes in Kinetically Constrained Redox Mixtures.

Authors:  Christopher W John; Denis A Proshlyakov
Journal:  Anal Chem       Date:  2019-07-12       Impact factor: 6.986

6.  The role of hydrogen bonding at the active site of a cupredoxin: the Phe114Pro azurin variant.

Authors:  Sachiko Yanagisawa; Mark J Banfield; Christopher Dennison
Journal:  Biochemistry       Date:  2006-07-25       Impact factor: 3.162

7.  Variation and analysis of second-sphere interactions and axial histidinate character in c-type cytochromes.

Authors:  Sarah E J Bowman; Kara L Bren
Journal:  Inorg Chem       Date:  2010-09-06       Impact factor: 5.165

8.  Metal and substrate binding to an Fe(II) dioxygenase resolved by UV spectroscopy with global regression analysis.

Authors:  Piotr K Grzyska; Robert P Hausinger; Denis A Proshlyakov
Journal:  Anal Biochem       Date:  2009-11-20       Impact factor: 3.365

9.  Protein conformational changes in tetraheme cytochromes detected by FTIR spectroelectrochemistry: Desulfovibrio desulfuricans Norway 4 and Desulfovibrio gigas cytochromes c3.

Authors:  D D Schlereth; V M Fernández; W Mäntele
Journal:  Biochemistry       Date:  1993-09-07       Impact factor: 3.162

10.  Modulating the cobalt redox potential through imidazole hydrogen bonding interactions in a supramolecular biomimetic protein-cofactor model.

Authors:  Marjorie Sonnay; Thomas Fox; Olivier Blacque; Felix Zelder
Journal:  Chem Sci       Date:  2016-02-23       Impact factor: 9.825

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