Literature DB >> 20142158

Discrete deformable model guided by partial active shape model for TRUS image segmentation.

Pingkun Yan1, Sheng Xu, Baris Turkbey, Jochen Kruecker.   

Abstract

Automatic prostate segmentation in transrectal ultrasound (TRUS) images is highly desired in many clinical applications. However, robust and automated prostate segmentation is challenging due to the low SNR in TRUS and the missing boundaries in shadow areas caused by calcifications or hyperdense prostate tissues. This paper presents a novel method of utilizing a priori shapes estimated from partial contours for segmenting the prostate. The proposed method is able to automatically extract prostate boundary from 2-D TRUS images without user interaction for shape correction in shadow areas. During the segmentation process, missing boundaries in shadow areas are estimated by using a partial active shape model, which takes partial contours as input but returns a complete shape estimation. With this shape guidance, an optimal search is performed by a discrete deformable model to minimize an energy functional for image segmentation, which is achieved efficiently by using dynamic programming. The segmentation of an image is executed in a multiresolution fashion from coarse to fine for robustness and computational efficiency. Promising segmentation results were demonstrated on 301 TRUS images grabbed from 19 patients with the average mean absolute distance error of 2.01 mm +/- 1.02 mm.

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Year:  2010        PMID: 20142158     DOI: 10.1109/TBME.2009.2037491

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  16 in total

1.  Statistical shape and texture model of quadrature phase information for prostate segmentation.

Authors:  Soumya Ghose; Arnau Oliver; Robert Martí; Xavier Lladó; Jordi Freixenet; Jhimli Mitra; Joan C Vilanova; Josep Comet-Batlle; Fabrice Meriaudeau
Journal:  Int J Comput Assist Radiol Surg       Date:  2011-06-01       Impact factor: 2.924

2.  A survey of GPU-based medical image computing techniques.

Authors:  Lin Shi; Wen Liu; Heye Zhang; Yongming Xie; Defeng Wang
Journal:  Quant Imaging Med Surg       Date:  2012-09

3.  The Stacked-Ellipse Algorithm: An Ultrasound-Based 3-D Uterine Segmentation Tool for Enabling Adaptive Radiotherapy for Uterine Cervix Cancer.

Authors:  Sarah A Mason; Ingrid M White; Susan Lalondrelle; Jeffrey C Bamber; Emma J Harris
Journal:  Ultrasound Med Biol       Date:  2020-01-08       Impact factor: 2.998

4.  Segmentation of prostate from ultrasound images using level sets on active band and intensity variation across edges.

Authors:  Xu Li; Chunming Li; Andriy Fedorov; Tina Kapur; Xiaoping Yang
Journal:  Med Phys       Date:  2016-06       Impact factor: 4.071

5.  MRI characterization of the dynamic effects of 5α-reductase inhibitors on prostate zonal volumes.

Authors:  Hong Truong; Jennifer Logan; Baris Turkbey; M Minhaj Siddiqui; Soroush Rais-Bahrami; Anthony N Hoang; Chad Pusateri; Brian Shuch; Annerleim Walton-Diaz; Srinivas Vourganti; Jeffrey Nix; Lambros Stamatakis; Colette Harris; Celene Chua; Peter L Choyke; Bradford J Wood; Peter A Pinto
Journal:  Can J Urol       Date:  2013-12       Impact factor: 1.344

6.  Automatic 3D Segmentation of Ultrasound Images Using Atlas Registration and Statistical Texture Prior.

Authors:  Xiaofeng Yang; David Schuster; Viraj Master; Peter Nieh; Aaron Fenster; Baowei Fei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2011-03-01

7.  Age-related changes in prostate zonal volumes as measured by high-resolution magnetic resonance imaging (MRI): a cross-sectional study in over 500 patients.

Authors:  Baris Turkbey; Robert Huang; Srinivas Vourganti; Hari Trivedi; Marcelino Bernardo; Pingkun Yan; Compton Benjamin; Peter A Pinto; Peter L Choyke
Journal:  BJU Int       Date:  2012-09-14       Impact factor: 5.588

8.  Ultrasound prostate segmentation based on multidirectional deeply supervised V-Net.

Authors:  Yang Lei; Sibo Tian; Xiuxiu He; Tonghe Wang; Bo Wang; Pretesh Patel; Ashesh B Jani; Hui Mao; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  Med Phys       Date:  2019-05-29       Impact factor: 4.071

9.  Label image constrained multiatlas selection.

Authors:  Pingkun Yan; Yihui Cao; Yuan Yuan; Baris Turkbey; Peter L Choyke
Journal:  IEEE Trans Cybern       Date:  2014-11-14       Impact factor: 11.448

10.  Learning Non-rigid Deformations for Robust, Constrained Point-based Registration in Image-Guided MR-TRUS Prostate Intervention.

Authors:  John A Onofrey; Lawrence H Staib; Saradwata Sarkar; Rajesh Venkataraman; Cayce B Nawaf; Preston C Sprenkle; Xenophon Papademetris
Journal:  Med Image Anal       Date:  2017-04-12       Impact factor: 8.545

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